Factsheet for Bra026378.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89278	Canola	extracellular, golgi, vacuole	99.08	97.59
CDY29275	Canola	extracellular, plasma membrane, vacuole	96.02	94.29
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	90.66	89.29
AT4G27110.1	Thale cress	extracellular	84.69	82.78
Bra020151.1-P	Field mustard	cytosol	28.79	72.59
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	68.15	66.62
Bra023941.1-P	Field mustard	plasma membrane	68.45	66.52
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	37.83	65.0
VIT_10s0116g00620.t01	Wine grape	extracellular	54.82	54.74
VIT_19s0177g00160.t01	Wine grape	plasma membrane	53.91	53.74
KRH27088	Soybean	mitochondrion	55.13	53.65
KRH22248	Soybean	golgi, vacuole	54.52	53.45
PGSC0003DMT400002678	Potato	vacuole	53.45	52.8
GSMUA_Achr3P21560_001	Banana	plasma membrane	52.37	52.13
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	48.7	51.71
PGSC0003DMT400037398	Potato	vacuole	52.22	51.43
GSMUA_Achr4P33540_001	Banana	vacuole	52.37	51.43
PGSC0003DMT400002688	Potato	cytosol	10.11	51.16
Zm00001d021661_P001	Maize	mitochondrion	52.99	51.03
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	52.37	50.97
KXG36369	Sorghum	mitochondrion	52.37	50.82
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	51.76	50.3
TraesCS7D01G136500.1	Wheat	mitochondrion	51.76	50.15
Os06t0685100-00	Rice	plasma membrane	52.22	49.93
TraesCS7B01G037700.1	Wheat	mitochondrion	51.3	49.7
TraesCS7A01G136600.1	Wheat	mitochondrion	51.15	49.55
Bra033528.1-P	Field mustard	plasma membrane	45.64	45.22
Bra036147.1-P	Field mustard	plasma membrane	44.87	44.26
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.73	41.83
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	18.68	28.11
Bra025406.1-P	Field mustard	extracellular	17.92	26.83
Bra030800.1-P	Field mustard	cytosol	17.0	26.62
Bra040587.1-P	Field mustard	extracellular	17.3	25.74
Bra012996.1-P	Field mustard	plasma membrane	17.92	25.6
Bra008684.1-P	Field mustard	extracellular	15.01	25.32
Bra019992.1-P	Field mustard	cytosol	15.31	25.19
Bra035951.1-P	Field mustard	plasma membrane	17.61	25.11
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	4.59	24.39
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	16.85	24.18
Bra035948.1-P	Field mustard	cytosol	3.52	23.71
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	7.2	22.82

Protein Annotations

MapMan:21.1.2.2	EnsemblPlantsGene:Bra026378	EnsemblPlants:Bra026378.1	EnsemblPlants:Bra026378.1-P	InterPro:COBRA_pln	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	UniProt:M4EC69	PFAM:PD140986	PFAM:PF04833
PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002545763	SEG:seg

Description

AT4G27110 (E=9e-225) COBL11 | COBL11 (COBRA-LIKE PROTEIN 11 PRECURSOR)

Coordinates

chrA01:-:9644580..9647424

Molecular Weight (calculated)

72375.0 Da

IEP (calculated)

9.432

GRAVY (calculated)

-0.312

Length

653 amino acids

Sequence
(BLAST)

001: MKKIRHVRLN LLLLQLPLIN LLLFTTFSFA QDYGEDVEKK DTPPPGLARC NGVYMSYNSG GREKLYPRTK NATAQAWSFK ATAMIVNTGI EEVKGWEMFV
101: GYRHREIIVS ATGAVSSDGD FPYDASNGTT FIGSPNTDLK TSIETAGDYT KISTNIEITG TLFGGRGTAT PLPRSIKLVN DGWQCPAATS KGGTMQVCCK
201: RNPKFKAKKK TKTKFTPRRH GDLNIIYDVT IDNDSPLGRL DHWNLTWEWM RGEFIHSLRG AYSAEKNPSE CLHSKAGQFY GDLDFSQVAT CQKKPIIKDL
301: PAERKEDKLI GMLPFCCKNG TLLPALMDAS KSRAIFQLQV YKVPPDQNRT AFFPPQHWKI DGIVNPQYKC GPPVRVDPTG FPDPSGLQAT TYAFATWQVI
401: CNITKPKPKA ARCCVSYSAF YNDSATPCNT CACGCGDIDT DTCNANARQL LLPPDSLLVP FENRTLKAKV WAKRKHLAFP KKLPCPDNCG ISLNWHVNSD
501: YADGWSASVT VFNWGANAVE DWFAAVDLGK AGLGYENVYS FNGSRVPPKN QTIFFQGVRG MNFLIGLTNG THPGRDPKVP GKMQSVISFK KHLGTLNIPR
601: GDGFPKRVFF NGEECELPKF FPKKSSGKRL SGIGFFPSIL LVITTFLVIM CSF

Best Arabidopsis Sequence Match ( AT4G27110.1 )
(BLAST)

001: MKKLRYVHLN LLLLLLPLIN LQFPTLSLAQ DYDEPKKDDT PPPGLARCNG VYMSYSSGGR EKLYPRTTNA TAQAWSFKST AMIVNTGIEE VKGWQMFVGF
101: HHREIIVSAT GAVSSDGDFP VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG WQCPAATSKG GTMQVCCKRN
201: PKFKAKEKVK TKFMPRQHGD LNIIYDVLQA YASSYMAQVT IDNTSPLGRL DHWNLTWEWM RGEFIHSMRG AYAAEKNTLE CLSSKAGQFY GDLDFSQVAN
301: CQKKPIIKDL PAERKDDNVT GKLPFCCKNG TLLPTHMDPS KSKAIFQLQV YKVPPDQNRT AFFPPRNWKI DGIVNPTYKC GPPIRVDATP FPDPSGLQAT
401: TYAIASWQVI CNITKPKPQA ARCCVSFSAF YNDSAIPCNT CACGCKDIDT DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG
501: ISLNWHLNSD YGNGWSARVT LFNWGNNAVE DWFGALDLGK AGLGYENIYS FNGSRVPPKN QTIFFQGLPG MNYLIGITNG TNPARDPQIP GKMQSVISFK
601: KKNLGSLNII GGDGFPKRVF FNGEECELPK YFPKKSSGMR LSGIRFLPSI LLAITTFHAI TDRLLTGV

Arabidopsis Description

COBL11COBRA-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9T045]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.