Factsheet for Bra023941.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 6
mitochondrion 2
vacuole 3
extracellular 2
endoplasmic reticulum 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	92.56	93.11
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	50.45	89.21
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	88.84	88.84
CDY55591	Canola	plasma membrane	97.47	78.73
CDY43072	Canola	plasma membrane	95.98	76.33
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	66.52	68.45
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	67.11	68.02
VIT_10s0116g00620.t01	Wine grape	extracellular	58.04	59.63
VIT_19s0177g00160.t01	Wine grape	plasma membrane	57.89	59.39
PGSC0003DMT400002678	Potato	vacuole	57.74	58.7
Bra020151.1-P	Field mustard	cytosol	22.32	57.92
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	52.98	57.89
GSMUA_Achr3P21560_001	Banana	plasma membrane	55.95	57.32
KRH22248	Soybean	golgi, vacuole	56.4	56.91
KRH27088	Soybean	mitochondrion	56.4	56.48
GSMUA_Achr4P33540_001	Banana	vacuole	55.06	55.64
PGSC0003DMT400037398	Potato	vacuole	54.76	55.51
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	55.36	55.44
KXG36369	Sorghum	mitochondrion	54.02	53.94
Zm00001d021661_P001	Maize	mitochondrion	53.57	53.1
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	52.83	52.83
TraesCS7D01G136500.1	Wheat	mitochondrion	52.98	52.82
TraesCS7A01G136600.1	Wheat	mitochondrion	52.98	52.82
PGSC0003DMT400002688	Potato	cytosol	10.12	52.71
TraesCS7B01G037700.1	Wheat	mitochondrion	52.53	52.37
Os06t0685100-00	Rice	plasma membrane	52.83	51.98
Bra033528.1-P	Field mustard	plasma membrane	47.92	48.86
Bra036147.1-P	Field mustard	plasma membrane	46.28	46.98
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	45.24	45.58
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	19.35	29.95
Bra030800.1-P	Field mustard	cytosol	17.26	27.82
Bra008684.1-P	Field mustard	extracellular	15.92	27.65
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	18.15	26.81
Bra025406.1-P	Field mustard	extracellular	17.11	26.38
Bra040587.1-P	Field mustard	extracellular	16.96	25.97
Bra019992.1-P	Field mustard	cytosol	15.33	25.94
Bra012996.1-P	Field mustard	plasma membrane	17.56	25.82
Bra035948.1-P	Field mustard	cytosol	3.72	25.77
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	7.74	25.24
Bra035951.1-P	Field mustard	plasma membrane	17.11	25.11
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	4.17	22.76

Protein Annotations

MapMan:21.1.2.2	EnsemblPlantsGene:Bra023941	EnsemblPlants:Bra023941.1	EnsemblPlants:Bra023941.1-P	InterPro:COBRA_pln	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	UniProt:M4E587	PFAM:PD140986	PFAM:PF04833
PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025448F3	SEG:seg

Description

AT3G20580 (E=0.0) COBL10 | COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)

Coordinates

chrA01:+:21218604..21221540

Molecular Weight (calculated)

74610.7 Da

IEP (calculated)

9.010

GRAVY (calculated)

-0.357

Length

672 amino acids

Sequence
(BLAST)

001: MKVFEVKTGM KIPWKARYSL TLLILLSSVL LLCNGQDYGT PTEDGAGGGE PPPEMARCNG IFMSYSFGSR EREYPHVKNV TAQSWAFKSS AMIVNAGKEE
101: LTGWQMFIGF RHKELIVSAT GASPLDGDYP LDASNGTTFV GSPNTDLKTS ILTAGDFTQI STNIEITGTL FGVAKGVTPM PRTLKLINDG WECPAAKRKG
201: GSMNVCCKRN PKFKVKTGPK TKFAPRRHGD LNIVYDVLQS FGSNYLAQVT IDNENPLGRL DRWNLTWEWT RGEIINTMRG AYTYKRDPSE CLYSRAGQYY
301: KDLDFSQVMN CQKKPAISDL PPERKDDNVT GKLPFCCKNG TLLPPLMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDSSGLPAV TYAIASWQVV CNITKPKAQA SRCCVSFSAF YNSSAIPCNT CACGCNDIDT TTCNADRNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPIP
501: KKLPCPDNCG VSINWHVNTD YRDGWTARLT VFNWRDFAFE DWFVAVEMGK AGPGYENVYS FNGTRVPPNN RTVMFQGLRD MNYLVGQVNG THPLRDPPVP
601: GKQQSVISFK KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR HGISVLMSLV LAMAAAFALM MD

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.