Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 9
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36369 | Sorghum | mitochondrion | 79.21 | 80.39 |
| Zm00001d021661_P001 | Maize | mitochondrion | 79.8 | 80.38 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 78.62 | 79.67 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 78.18 | 79.23 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 78.18 | 79.23 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 77.75 | 79.02 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 61.93 | 64.48 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 59.59 | 61.2 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 54.76 | 57.1 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 53.15 | 55.5 |
| CDY36030 | Canola | vacuole | 51.68 | 54.48 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 52.12 | 53.29 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 52.27 | 53.12 |
| PGSC0003DMT400002678 | Potato | vacuole | 51.39 | 53.1 |
| Bra001795.1-P | Field mustard | endoplasmic reticulum, vacuole | 51.83 | 52.99 |
| Bra023941.1-P | Field mustard | plasma membrane | 51.98 | 52.83 |
| Bra035768.1-P | Field mustard | mitochondrion, peroxisome, plastid | 29.28 | 52.63 |
| CDY19626 | Canola | mitochondrion | 31.63 | 52.43 |
| PGSC0003DMT400037398 | Potato | vacuole | 50.81 | 52.34 |
| KRH27599 | Soybean | extracellular | 49.78 | 52.23 |
| Bra026378.1-P | Field mustard | extracellular, golgi, vacuole | 49.93 | 52.22 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 50.81 | 52.18 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 50.51 | 52.04 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 46.85 | 52.03 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 50.51 | 51.88 |
| KRH77883 | Soybean | extracellular, plasma membrane, vacuole | 45.24 | 51.59 |
| AT4G27110.1 | Thale cress | extracellular | 50.37 | 51.5 |
| Bra010411.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 49.49 | 50.98 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 49.93 | 50.82 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.81 | 50.81 |
| KRH22248 | Soybean | golgi, vacuole | 47.88 | 49.1 |
| KRH27088 | Soybean | mitochondrion | 47.88 | 48.73 |
| PGSC0003DMT400005270 | Potato | cytosol | 50.95 | 48.6 |
| CDY09102 | Canola | cytosol | 18.16 | 47.51 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 46.56 | 47.39 |
| PGSC0003DMT400002688 | Potato | cytosol | 8.93 | 47.29 |
| Solyc02g080250.1.1 | Tomato | cytosol | 23.43 | 46.78 |
| Bra020151.1-P | Field mustard | cytosol | 17.42 | 45.95 |
| CDY57659 | Canola | cytosol | 9.66 | 43.14 |
| Os07t0690900-01 | Rice | plasma membrane | 42.31 | 42.81 |
| CDY55591 | Canola | plasma membrane | 51.83 | 42.55 |
| CDY43072 | Canola | plasma membrane | 51.68 | 41.78 |
| Os07t0604400-00 | Rice | extracellular | 17.72 | 26.83 |
| Os03t0416300-01 | Rice | extracellular | 17.72 | 26.42 |
| Os07t0604300-01 | Rice | extracellular | 16.98 | 26.01 |
| Os03t0754500-00 | Rice | extracellular | 8.05 | 25.7 |
| Os10t0497700-01 | Rice | extracellular | 15.96 | 25.65 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 17.42 | 25.43 |
| Os05t0386800-01 | Rice | extracellular | 16.84 | 25.16 |
| Os04t0540300-00 | Rice | plasma membrane | 15.96 | 24.83 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:4341879 | ProteinID:BAD45565.1 | ProteinID:BAF20311.1 | ProteinID:BAS99187.1 | InterPro:COBRA_pln |
| ProteinID:EAZ38064.1 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:Os06g0685100 |
| EnsemblPlants:Os06t0685100-00 | PFAM:PD140986 | PFAM:PF04833 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | UniProt:Q655F2 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000043A327 | RefSeq:XP_015642639.1 | SEG:seg | : |
Description
Similar to COBRA-like protein 10 precursor. (Os06t0685100-00)
Coordinates
chr6:+:28551567..28553842
Molecular Weight (calculated)
75166.9 Da
IEP (calculated)
8.587
GRAVY (calculated)
-0.301
Length
683 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLRRRWAAL LLGVAVVLAV AAAGARAQDY NNGGGGDGED EEEEEKPSFK AQEACNGAFL TYTFTEREKE YPRTKNATAQ AFAFKATATV LNTMTEDLKA
101: WQMFVGFQHK EILVTVGGAV LLDGTDLPAN VSGGVTFAGY PMANLLNSIE TAGDLTQIQA QIDITGTQFG VKPPTAPMPR TIKLSNPGFR CPKPTHKQSV
201: MYVCCVKDPK FKAKKVNTTT RYLPRQKADL TIAYDVLQAF GNNYMVQVTI DNWSPIGRLD NWNLTWEWKR GEFIYKMRGA YTLNKEGPAC VYSPAAGYYK
301: DFDFTPAYSC EKRPIVVDLP PEREKDKDVG NIPFCCKNGT LLPPTMDESK SRAVFQMQVF KLPPDLNRTA LYPPQNWKII GKLNPQYACR QPVRVSPVVF
401: PDQTGLMSST PAVASWQVAC NITRPKRRAA KCCVSFSAYY DDSVVPCNTC ACGCGGGGGG GNDTATCDAD ARATPLPPEA LLIPFDNRTA KGRAWAKIKH
501: RRVPNPMPCG DNCGLSVNWH IMNNYKSGWA ARITIFNWQD YTFKDWFAAV TMRDHYSGYE NVYSFNGTKM GAPFNNSIFM QGLPGLTYLE PITDGRTPED
601: PRVPGKQQSV ISFSRKDAPN VNIAKGEGFP KRLYFDGEEC ALPDTIPKPS SAHRRAAAAA SLGQIVMAVV LVMVVAVVDS LCL
101: WQMFVGFQHK EILVTVGGAV LLDGTDLPAN VSGGVTFAGY PMANLLNSIE TAGDLTQIQA QIDITGTQFG VKPPTAPMPR TIKLSNPGFR CPKPTHKQSV
201: MYVCCVKDPK FKAKKVNTTT RYLPRQKADL TIAYDVLQAF GNNYMVQVTI DNWSPIGRLD NWNLTWEWKR GEFIYKMRGA YTLNKEGPAC VYSPAAGYYK
301: DFDFTPAYSC EKRPIVVDLP PEREKDKDVG NIPFCCKNGT LLPPTMDESK SRAVFQMQVF KLPPDLNRTA LYPPQNWKII GKLNPQYACR QPVRVSPVVF
401: PDQTGLMSST PAVASWQVAC NITRPKRRAA KCCVSFSAYY DDSVVPCNTC ACGCGGGGGG GNDTATCDAD ARATPLPPEA LLIPFDNRTA KGRAWAKIKH
501: RRVPNPMPCG DNCGLSVNWH IMNNYKSGWA ARITIFNWQD YTFKDWFAAV TMRDHYSGYE NVYSFNGTKM GAPFNNSIFM QGLPGLTYLE PITDGRTPED
601: PRVPGKQQSV ISFSRKDAPN VNIAKGEGFP KRLYFDGEEC ALPDTIPKPS SAHRRAAAAA SLGQIVMAVV LVMVVAVVDS LCL
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.