Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023941.1-P | Field mustard | plasma membrane | 76.33 | 95.98 |
| CDY55591 | Canola | plasma membrane | 93.73 | 95.19 |
| CDY36030 | Canola | vacuole | 70.06 | 91.36 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 71.24 | 90.12 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 68.52 | 86.16 |
| CDY19626 | Canola | mitochondrion | 41.07 | 84.22 |
| CDY57659 | Canola | cytosol | 13.61 | 75.16 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 53.61 | 68.12 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 52.9 | 67.22 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 52.66 | 67.12 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 54.08 | 66.91 |
| CDY09102 | Canola | cytosol | 18.58 | 60.15 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 46.04 | 59.48 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 46.04 | 59.39 |
| PGSC0003DMT400002678 | Potato | vacuole | 45.56 | 58.25 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 42.13 | 57.89 |
| KRH22248 | Soybean | golgi, vacuole | 44.62 | 56.61 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 43.67 | 56.25 |
| KRH27088 | Soybean | mitochondrion | 44.5 | 56.04 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 43.91 | 55.79 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 44.14 | 55.59 |
| PGSC0003DMT400037398 | Potato | vacuole | 43.43 | 55.35 |
| KXG36369 | Sorghum | mitochondrion | 42.84 | 53.79 |
| Zm00001d021661_P001 | Maize | mitochondrion | 42.49 | 52.95 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 41.66 | 52.38 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 41.66 | 52.23 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 41.66 | 52.23 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 41.3 | 51.78 |
| Os06t0685100-00 | Rice | plasma membrane | 41.78 | 51.68 |
| PGSC0003DMT400002688 | Potato | cytosol | 7.81 | 51.16 |
| CDY34424 | Canola | plasma membrane | 38.46 | 49.32 |
| CDY32210 | Canola | plasma membrane | 38.22 | 48.94 |
| CDY49611 | Canola | plasma membrane | 37.04 | 47.28 |
| CDY00037 | Canola | plasma membrane | 36.92 | 47.13 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.21 | 46.02 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.09 | 45.73 |
| CDY66895 | Canola | cytosol | 2.01 | 29.82 |
| CDX90983 | Canola | extracellular | 15.03 | 29.2 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 15.27 | 28.29 |
| CDY26444 | Canola | plastid | 11.95 | 27.6 |
| CDX69511 | Canola | plasma membrane | 14.67 | 27.25 |
| CDY70289 | Canola | extracellular | 12.66 | 26.95 |
| CDX93481 | Canola | plasma membrane | 13.96 | 26.88 |
| CDX85277 | Canola | extracellular | 13.85 | 26.83 |
| CDX87193 | Canola | plasma membrane | 14.32 | 26.54 |
| CDY43250 | Canola | plasma membrane | 14.32 | 26.48 |
| CDX86358 | Canola | extracellular | 13.61 | 26.38 |
| CDY31063 | Canola | plasma membrane | 13.49 | 26.27 |
| CDY02184 | Canola | plasma membrane | 14.2 | 26.26 |
| CDY58695 | Canola | extracellular | 6.39 | 26.21 |
| CDY16831 | Canola | plasma membrane | 14.2 | 26.2 |
| CDY60470 | Canola | plasma membrane | 14.2 | 26.2 |
| CDY58691 | Canola | plasma membrane | 14.08 | 25.98 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 6.27 | 25.73 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 13.61 | 25.27 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 2.25 | 22.35 |
| CDY42842 | Canola | cytosol | 3.08 | 21.31 |
| CDY26445 | Canola | cytosol | 4.26 | 21.3 |
| CDY29033 | Canola | cytosol | 4.26 | 19.78 |
| CDX94950 | Canola | nucleus | 13.25 | 19.65 |
| CDX87194 | Canola | mitochondrion | 4.62 | 18.66 |
| CDY14723 | Canola | cytosol | 6.27 | 16.67 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 15.03 | 14.8 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:21.1.2.2 | GO:A0A078HYW2 | UniProt:A0A078HYW2 | EnsemblPlants:CDY43072 | ProteinID:CDY43072 |
| ProteinID:CDY43072.1 | InterPro:COBRA_pln | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0022900 | GO:GO:0031225 | GO:GO:0040007 |
| EnsemblPlantsGene:GSBRNA2T00075915001 | InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PD140986 | PFAM:PF02298 |
| PFAM:PF04833 | PFscan:PS51485 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 |
| SignalP:SignalP-noTM | UniParc:UPI0004EEC428 | SEG:seg | : | : | : |
Description
BnaCnng10780DBnaCnng10780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYW2]
Coordinates
chrLK032544:+:104365..108206
Molecular Weight (calculated)
93171.8 Da
IEP (calculated)
8.300
GRAVY (calculated)
-0.384
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVIEVKTGM KIPWKARYSL TLLILLPSVL LLCNGQDYGT PTEDGAGGGE PPPEMTRCNG IFMSYSFGSR ETEYPHVKNV TAQSWAFKSS AMIVNVGKEE
101: LTGWQMFIGF RHKELIVSAT GASPVDGDYP LDASNGTTFV GSPNTDLKTS IETAGDFTQI STNIEITGTL FGVAKGVTPM PRTLKLINDG WECPAAKRKG
201: SSMNVCCKRN PKFKVKTGPK TKFAPRRHGD LNIVYDVLQS FGSNYLAQVT IDNENPLGRL DRWNLTWEWT RGEIINTMRG AYTYKRDPSE CLYSRAGQYY
301: KDLDFSQVMN CQKKPAISDL PPERKDDNVT GKLPFCCKNG TLLPPLMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDSSGLPAV TYAIASWQIV CNITKPKAQA SRCCVSFSAF YNSSAIPCNT CACGCNDIDT TTCNADRNPL LLPPDALLVP FDNRTLKAKA WAQQNHMPIP
501: KKLPCPDNCG VSINWHVNTD YRDGWTARLT VFNWRDFAFE DWFVAVEMGK AGPGYENVYS FNGTRVPPNN RTVMFQGLRD MNYLVGQVNG TRPLRDPPVP
601: GKQQSVISFK KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSLGHR HAWCFDAVAE ELEGADVEKI FPTLESLWSV VQKVGPFLPG LKLWAEQSRF
701: QVGDSLLFVY QPNQDSVFQV TRDAYDSCNT DAPTAKFADG KTPFALTHSG PYYFISGNKD NCNKNEKLVV IVMADRNGKT TSSSSPPSQA PAPSGEAAPS
801: PPITSNLEPP ATTPTQETPN NAASSSSSFV SALLGAALAS TLFLH
101: LTGWQMFIGF RHKELIVSAT GASPVDGDYP LDASNGTTFV GSPNTDLKTS IETAGDFTQI STNIEITGTL FGVAKGVTPM PRTLKLINDG WECPAAKRKG
201: SSMNVCCKRN PKFKVKTGPK TKFAPRRHGD LNIVYDVLQS FGSNYLAQVT IDNENPLGRL DRWNLTWEWT RGEIINTMRG AYTYKRDPSE CLYSRAGQYY
301: KDLDFSQVMN CQKKPAISDL PPERKDDNVT GKLPFCCKNG TLLPPLMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDSSGLPAV TYAIASWQIV CNITKPKAQA SRCCVSFSAF YNSSAIPCNT CACGCNDIDT TTCNADRNPL LLPPDALLVP FDNRTLKAKA WAQQNHMPIP
501: KKLPCPDNCG VSINWHVNTD YRDGWTARLT VFNWRDFAFE DWFVAVEMGK AGPGYENVYS FNGTRVPPNN RTVMFQGLRD MNYLVGQVNG TRPLRDPPVP
601: GKQQSVISFK KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSLGHR HAWCFDAVAE ELEGADVEKI FPTLESLWSV VQKVGPFLPG LKLWAEQSRF
701: QVGDSLLFVY QPNQDSVFQV TRDAYDSCNT DAPTAKFADG KTPFALTHSG PYYFISGNKD NCNKNEKLVV IVMADRNGKT TSSSSPPSQA PAPSGEAAPS
801: PPITSNLEPP ATTPTQETPN NAASSSSSFV SALLGAALAS TLFLH
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.