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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 96.94 97.58
CDY43250 Canola plasma membrane 97.16 97.37
AT3G02210.1 Thale cress extracellular 88.65 89.82
CDX86358 Canola extracellular 72.71 76.38
CDX85277 Canola extracellular 71.83 75.46
KRH72178 Soybean mitochondrion 60.48 75.07
CDY66895 Canola cytosol 9.17 73.68
CDY70289 Canola extracellular 63.32 73.05
KRH01360 Soybean extracellular, golgi, plasma membrane 70.09 71.65
KRH45084 Soybean extracellular, golgi, plasma membrane 69.21 70.76
CDY24004 Canola cytosol, nucleus, plastid 13.1 70.59
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 70.31 70.46
KRG93684 Soybean extracellular, vacuole 69.21 69.82
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 68.78 68.78
KRH18352 Soybean plasma membrane 68.56 68.56
Zm00001d031479_P001 Maize cytosol, mitochondrion 24.45 68.29
CDY02184 Canola plasma membrane 67.9 68.05
Os07t0604300-01 Rice extracellular 65.94 67.71
CDY58691 Canola plasma membrane 67.47 67.47
CDX87193 Canola plasma membrane 67.03 67.32
CDY16831 Canola plasma membrane 67.25 67.25
EER97506 Sorghum extracellular, plasma membrane 67.03 67.03
GSMUA_Achr2P06240_001 Banana mitochondrion 69.0 66.25
Zm00001d013256_P001 Maize extracellular 64.85 66.15
EER90860 Sorghum extracellular, golgi, plasma membrane 64.85 66.15
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 65.72 65.43
Os05t0386800-01 Rice extracellular 65.28 65.43
TraesCS6D01G364400.1 Wheat extracellular 63.32 64.88
EER90859 Sorghum extracellular 60.04 64.71
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 63.54 64.38
Os03t0754500-00 Rice extracellular 29.91 64.02
TraesCS6B01G418400.1 Wheat extracellular 62.45 63.98
OQU92393 Sorghum extracellular 64.19 63.77
TraesCS6A01G379800.1 Wheat extracellular 62.23 63.76
Os03t0416300-01 Rice extracellular 63.76 63.76
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 63.1 63.24
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 63.1 63.24
CDX90983 Canola extracellular 60.04 63.22
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 62.88 63.02
HORVU5Hr1G095910.12 Barley extracellular, vacuole 62.45 62.17
TraesCS4A01G231200.1 Wheat extracellular 60.7 60.43
CDY26444 Canola plastid 48.25 60.38
TraesCS2A01G175100.1 Wheat extracellular 59.61 60.26
CDX69511 Canola plasma membrane 59.83 60.22
CDX85543 Canola extracellular, plasma membrane, vacuole 59.83 60.09
TraesCS4D01G082700.1 Wheat extracellular 60.04 59.65
TraesCS3A01G409900.1 Wheat plastid 36.03 59.57
TraesCS2D01G182500.1 Wheat golgi 59.17 59.56
TraesCS4B01G084800.1 Wheat extracellular 59.17 59.56
HORVU4Hr1G014530.1 Barley extracellular 60.04 59.4
CDY29033 Canola cytosol 23.58 59.34
CDY42842 Canola cytosol 15.72 59.02
TraesCS2B01G201500.1 Wheat plasma membrane 58.3 58.17
HORVU2Hr1G033070.14 Barley mitochondrion 59.39 57.87
Os10t0497700-01 Rice extracellular 52.62 56.71
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 50.66 55.5
TraesCS5D01G402000.1 Wheat extracellular 27.51 55.26
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 55.9 54.24
TraesCS5B01G397000.2 Wheat extracellular 26.86 54.19
CDY02181 Canola endoplasmic reticulum, extracellular 24.24 53.88
TraesCS3D01G404800.2 Wheat plasma membrane 53.06 53.17
CDY58695 Canola extracellular 23.58 52.43
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 31.44 51.61
CDY31063 Canola plasma membrane 46.94 49.54
CDX93481 Canola plasma membrane 47.38 49.43
CDY20671 Canola extracellular, plasma membrane, vacuole 47.38 47.69
CDY26445 Canola cytosol 17.03 46.15
CDY14723 Canola cytosol 27.95 40.25
CDX94950 Canola nucleus 43.89 35.26
CDX70627 Canola cytosol, nucleus, plasma membrane 60.48 32.28
CDX87194 Canola mitochondrion 11.57 25.36
CDY57659 Canola cytosol 7.86 23.53
CDY09102 Canola cytosol 11.35 19.92
CDY19626 Canola mitochondrion 17.9 19.9
CDY32210 Canola plasma membrane 27.51 19.09
CDY34424 Canola plasma membrane 27.29 18.97
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 26.86 18.5
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 26.64 18.29
CDX82237 Canola endoplasmic reticulum, vacuole 25.76 17.66
CDY36030 Canola vacuole 24.89 17.59
CDY00037 Canola plasma membrane 25.33 17.52
CDY49611 Canola plasma membrane 25.33 17.52
CDX89278 Canola extracellular, golgi, vacuole 24.24 16.74
CDY29275 Canola extracellular, plasma membrane, vacuole 24.24 16.69
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 24.02 16.54
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 24.02 16.11
CDY55591 Canola plasma membrane 26.42 14.54
CDY43072 Canola plasma membrane 26.2 14.2
Protein Annotations
MapMan:21.1.2.2GO:A0A078J6W4UniProt:A0A078J6W4EnsemblPlants:CDY60470ProteinID:CDY60470ProteinID:CDY60470.1
InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00029636001PFAM:PD140986
PFAM:PF04833PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-noTMUniParc:UPI0004EEA627
SEG:seg:::::
Description
BnaAnng16830DBnaAnng16830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6W4]
Coordinates
chrLK033884:+:21041..23214
Molecular Weight (calculated)
50790.9 Da
IEP (calculated)
9.142
GRAVY (calculated)
-0.109
Length
458 amino acids
Sequence
(BLAST)
001: MGFLCSSTSS SIVFKLGVSL VFLVSFSSYT PADAYDPLDP SGNITIKWDI ITWTGDGYVA TVTMYNFQQY RHIQAPGWTL GWSWAKREVI WGMNGGQTTE
101: QGDCSKFKGT IPHCCKKTPS VVDLLPGTPY NQQVANCCRG GVINSWAQDP ATAVSSFQLT VGQAGTTNKT VRVPKNFTLK APGPGYTCGP GKIVKPSRFV
201: GTDKRRVTQA MMTWNVTCTY SQFLAQRTPT CCVSLSSFYN STIVPCPTCS CGCRNTSQPG NCVDSKGPRI ASVVVPNTGK SLYVPPLVQC TNHMCPVRIH
301: WHVKVNYKAY WRVKVTITNF NYNMNYSQWN LVVQHPNFDN LTQTFSFNYK PLIPYASIND TGILWGVKFY NDLLMQAGPY GNVQSELLFQ KEASAFTLEK
401: GWAFPRRIYF NGDNCVMPPP DSYPWLPNTA SYKLIGSLFA RIAGSISLLL TAFLHGIL
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.