Factsheet for TraesCS3B01G443000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G409900.1	Wheat	plastid	62.44	94.22
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	86.6	76.69
TraesCS3D01G404800.2	Wheat	plasma membrane	79.19	72.43
Os07t0604300-01	Rice	extracellular	64.83	60.76
EER97506	Sorghum	extracellular, plasma membrane	66.03	60.26
KRH72178	Soybean	mitochondrion	52.63	59.62
VIT_14s0083g01160.t01	Wine grape	vacuole	60.53	58.03
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	63.64	57.83
KRH01360	Soybean	extracellular, golgi, plasma membrane	60.53	56.47
PGSC0003DMT400003470	Potato	extracellular	59.81	55.93
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	60.77	55.7
Bra025406.1-P	Field mustard	extracellular	57.89	55.5
CDX86358	Canola	extracellular	57.89	55.5
Solyc02g065770.2.1	Tomato	extracellular	58.85	55.41
KRH45084	Soybean	extracellular, golgi, plasma membrane	59.33	55.36
KRG93684	Soybean	extracellular, vacuole	60.05	55.29
Solyc02g089120.2.1	Tomato	extracellular	59.09	55.26
PGSC0003DMT400068328	Potato	extracellular	58.61	55.18
CDY70289	Canola	extracellular	52.39	55.16
KRH54735	Soybean	endoplasmic reticulum	60.05	55.04
TraesCS2B01G201500.1	Wheat	plasma membrane	60.29	54.9
CDX85277	Canola	extracellular	57.18	54.82
KRH03165	Soybean	extracellular	59.09	54.41
KRH63181	Soybean	endoplasmic reticulum	59.33	54.39
KRH18352	Soybean	plasma membrane	59.33	54.15
Bra040587.1-P	Field mustard	extracellular	56.7	53.99
TraesCS4B01G084800.1	Wheat	extracellular	58.37	53.63
CDY42842	Canola	cytosol	15.55	53.28
TraesCS6B01G418400.1	Wheat	extracellular	56.7	53.02
AT3G29810.1	Thale cress	extracellular	55.5	52.61
TraesCS5B01G396900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.18	52.3
AT3G02210.1	Thale cress	extracellular	56.22	51.99
CDY02184	Canola	plasma membrane	56.7	51.86
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	56.46	51.75
CDY58691	Canola	plasma membrane	56.7	51.75
Bra012996.1-P	Field mustard	plasma membrane	56.46	51.64
CDX87193	Canola	plasma membrane	55.98	51.32
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	15.07	51.22
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	55.74	51.21
CDY43250	Canola	plasma membrane	55.98	51.2
CDY16831	Canola	plasma membrane	55.98	51.09
CDY60470	Canola	plasma membrane	55.5	50.66
Bra035951.1-P	Field mustard	plasma membrane	55.26	50.44
TraesCS2B01G201400.1	Wheat	plasma membrane	52.87	49.33
TraesCS5B01G101400.1	Wheat	extracellular	52.87	49.11
TraesCS6B01G361700.1	Wheat	plastid	22.73	42.99
KRH56778	Soybean	extracellular	20.1	40.19
TraesCS6B01G185800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	39.47	39.76
TraesCS5B01G397000.2	Wheat	extracellular	21.53	39.65
CDY24004	Canola	cytosol, nucleus, plastid	7.89	38.82
TraesCS2B01G406700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.56	36.6
CDY29033	Canola	cytosol	15.07	34.62
CDY14723	Canola	cytosol	21.53	28.3
TraesCS4B01G187300.1	Wheat	golgi	26.32	16.49
TraesCS7B01G037700.1	Wheat	mitochondrion	25.84	16.02
TraesCS2B01G107700.1	Wheat	plasma membrane	23.92	15.17

Protein Annotations

EnsemblPlants:TraesCS3B01G443000.1	EnsemblPlantsGene:TraesCS3B01G443000	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31673	PANTHER:PTHR31673:SF7	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	SEG:seg
MapMan:21.1.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:683427991..683431125

Molecular Weight (calculated)

46545.6 Da

IEP (calculated)

8.711

GRAVY (calculated)

-0.215

Length

418 amino acids

Sequence
(BLAST)

001: MECVLQIFIL SELRSLKGLS NGLLLGAYDP LDPTGNITIR WDVRSWVPDS YVAEVSLFNY QQYRHFSHRD GSSGGCGQRR SCKVNPEIVD LLPGAPSNRQ
101: RANCCKGGVL SSLAQYPANA VASFEVAVGR SGTTTKTLEL PVNFTLKAPG PGYTCGPATK LDEPTKFTTP DGRRKTQAHM TWTVTCTYSP FRALRSTCCL
201: SLSAFYSDVP VTCPKCSCGC QDNITKPGIC VEGNSPYLGS VMNGQDKNGL APLVQCTTHM CPIRVHWHVK ANYKEYWRAK ITVTNFNYRM NYSQWNLVAQ
301: HPNFNSLTSI TSFNYTALNP YGLINDTALL WGIRHYNDYL LTAGPDGYVQ SELLFRKDPS TFTLRAGWAF PRRVYFNGDK CVMPPPDAYP WLPNTSTKST
401: VSVIVPLVLW ILLANPYF

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.