Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66895 | Canola | cytosol | 12.5 | 100.0 |
| CDY16831 | Canola | plasma membrane | 99.34 | 98.91 |
| Bra035951.1-P | Field mustard | plasma membrane | 98.68 | 98.25 |
| CDY02184 | Canola | plasma membrane | 94.08 | 93.87 |
| CDY58691 | Canola | plasma membrane | 94.08 | 93.67 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 92.76 | 92.76 |
| CDY42842 | Canola | cytosol | 21.27 | 79.51 |
| VIT_17s0000g05070.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 76.1 | 76.1 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 26.97 | 75.0 |
| PGSC0003DMT400003470 | Potato | extracellular | 73.46 | 74.94 |
| Solyc02g065770.2.1 | Tomato | extracellular | 72.81 | 74.77 |
| PGSC0003DMT400068328 | Potato | extracellular | 72.59 | 74.55 |
| Solyc02g089120.2.1 | Tomato | extracellular | 73.03 | 74.5 |
| KRH54735 | Soybean | endoplasmic reticulum | 74.34 | 74.34 |
| KRH63181 | Soybean | endoplasmic reticulum | 73.9 | 73.9 |
| KRH03165 | Soybean | extracellular | 72.81 | 73.13 |
| GSMUA_Achr4P01440_001 | Banana | extracellular, plasma membrane | 73.25 | 73.09 |
| CDX86358 | Canola | extracellular | 69.52 | 72.71 |
| GSMUA_Achr1P24500_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 72.81 | 72.49 |
| CDY70289 | Canola | extracellular | 62.72 | 72.04 |
| CDX85277 | Canola | extracellular | 68.42 | 71.56 |
| Os03t0754500-00 | Rice | extracellular | 33.11 | 70.56 |
| Zm00001d013256_P001 | Maize | extracellular | 68.42 | 69.49 |
| EER90860 | Sorghum | extracellular, golgi, plasma membrane | 68.2 | 69.27 |
| Os05t0386800-01 | Rice | extracellular | 69.3 | 69.15 |
| Os07t0604300-01 | Rice | extracellular | 67.54 | 69.06 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 67.98 | 68.58 |
| GSMUA_Achr2P06240_001 | Banana | mitochondrion | 70.61 | 67.51 |
| CDY60470 | Canola | plasma membrane | 67.32 | 67.03 |
| CDY43250 | Canola | plasma membrane | 66.89 | 66.74 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 65.13 | 66.44 |
| EER97506 | Sorghum | extracellular, plasma membrane | 66.67 | 66.38 |
| EER90859 | Sorghum | extracellular | 61.84 | 66.35 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 66.01 | 65.86 |
| TraesCS5A01G392000.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 66.01 | 65.86 |
| TraesCS6A01G379800.1 | Wheat | extracellular | 64.47 | 65.77 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 65.79 | 65.65 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 64.25 | 65.55 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 12.06 | 64.71 |
| CDX90983 | Canola | extracellular | 61.62 | 64.6 |
| OQU92393 | Sorghum | extracellular | 64.91 | 64.21 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 64.69 | 64.13 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 64.25 | 63.7 |
| Os03t0416300-01 | Rice | extracellular | 63.38 | 63.1 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 28.07 | 62.14 |
| CDX69511 | Canola | plasma membrane | 61.4 | 61.54 |
| TraesCS4A01G231200.1 | Wheat | extracellular | 62.06 | 61.52 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 60.96 | 60.96 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 61.62 | 60.95 |
| CDY26444 | Canola | plastid | 48.9 | 60.93 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 61.84 | 60.91 |
| CDY58695 | Canola | extracellular | 27.41 | 60.68 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 60.53 | 60.66 |
| TraesCS2A01G175100.1 | Wheat | extracellular | 60.09 | 60.49 |
| TraesCS3A01G409900.1 | Wheat | plastid | 36.62 | 60.29 |
| TraesCS2D01G182500.1 | Wheat | golgi | 60.09 | 60.22 |
| KRH56778 | Soybean | extracellular | 27.19 | 59.33 |
| Os10t0497700-01 | Rice | extracellular | 54.39 | 58.35 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 60.09 | 58.3 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 58.55 | 58.17 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 28.73 | 57.46 |
| CDY29033 | Canola | cytosol | 22.81 | 57.14 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 28.29 | 56.83 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 51.32 | 55.98 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 57.46 | 55.51 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 33.77 | 55.2 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 53.07 | 52.95 |
| CDX93481 | Canola | plasma membrane | 47.15 | 48.97 |
| CDY31063 | Canola | plasma membrane | 46.49 | 48.85 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 46.49 | 46.59 |
| CDY26445 | Canola | cytosol | 16.45 | 44.38 |
| CDY14723 | Canola | cytosol | 28.51 | 40.88 |
| CDX94950 | Canola | nucleus | 43.86 | 35.09 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 62.06 | 32.98 |
| CDX87194 | Canola | mitochondrion | 14.47 | 31.58 |
| CDY09102 | Canola | cytosol | 12.28 | 21.46 |
| CDY57659 | Canola | cytosol | 7.02 | 20.91 |
| CDY19626 | Canola | mitochondrion | 18.42 | 20.39 |
| CDY00037 | Canola | plasma membrane | 26.32 | 18.13 |
| CDY49611 | Canola | plasma membrane | 26.32 | 18.13 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 26.32 | 18.1 |
| CDY34424 | Canola | plasma membrane | 26.1 | 18.06 |
| CDY32210 | Canola | plasma membrane | 26.1 | 18.03 |
| CDY36030 | Canola | vacuole | 25.44 | 17.9 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 25.88 | 17.74 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 25.88 | 17.74 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.22 | 17.29 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.88 | 17.28 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 25.22 | 17.22 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.0 | 17.09 |
| CDY55591 | Canola | plasma membrane | 26.54 | 14.54 |
| CDY43072 | Canola | plasma membrane | 26.54 | 14.32 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078DIT4 | EnsemblPlants:CDX87193 | ProteinID:CDX87193 | ProteinID:CDX87193.1 | InterPro:COBRA_pln |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00146119001 | PFAM:PD140986 | PFAM:PF04833 |
| PIRSF:PIRSF038122 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EF2707 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g05080D
Coordinates
chrLK031849:-:1105154..1108120
Molecular Weight (calculated)
50987.1 Da
IEP (calculated)
8.632
GRAVY (calculated)
-0.155
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSVSRSTS VVSKMSFLAV LVVFLISSSY ITSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIPSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVLNSWVQ DPGNAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKVVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNKT ESGACLDPDT PHLASVVSPP TKKGTILPPL VQCTRHLCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYS QWNMVAQHPN FDNITQIFSF NYKSITPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQATFS
401: FEKGWAFPRR IYFNGDNCVM PPPDTYPFLP NGGFRPEVSV FASVLLPLLL LFFFSA
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVLNSWVQ DPGNAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKVVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNKT ESGACLDPDT PHLASVVSPP TKKGTILPPL VQCTRHLCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYS QWNMVAQHPN FDNITQIFSF NYKSITPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQATFS
401: FEKGWAFPRR IYFNGDNCVM PPPDTYPFLP NGGFRPEVSV FASVLLPLLL LFFFSA
001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
Arabidopsis Description
COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.