Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0416300-01 | Rice | extracellular | 78.52 | 79.04 |
| TraesCS4A01G231200.1 | Wheat | extracellular | 77.87 | 78.04 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 78.09 | 77.75 |
| EER97506 | Sorghum | extracellular, plasma membrane | 77.01 | 77.51 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 76.14 | 77.14 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 76.57 | 76.57 |
| KRH72178 | Soybean | mitochondrion | 57.7 | 72.09 |
| VIT_14s0083g01160.t01 | Wine grape | vacuole | 67.9 | 71.79 |
| PGSC0003DMT400003470 | Potato | extracellular | 68.11 | 70.25 |
| Solyc02g089120.2.1 | Tomato | extracellular | 67.9 | 70.02 |
| KRH54735 | Soybean | endoplasmic reticulum | 69.2 | 69.96 |
| KRH03165 | Soybean | extracellular | 68.55 | 69.6 |
| Solyc02g065770.2.1 | Tomato | extracellular | 66.81 | 69.37 |
| CDX86358 | Canola | extracellular | 65.29 | 69.04 |
| Bra025406.1-P | Field mustard | extracellular | 65.29 | 69.04 |
| KRH63181 | Soybean | endoplasmic reticulum | 68.11 | 68.86 |
| CDX85277 | Canola | extracellular | 65.08 | 68.81 |
| VIT_17s0000g05070.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 67.9 | 68.64 |
| PGSC0003DMT400068328 | Potato | extracellular | 65.94 | 68.47 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 65.94 | 67.86 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 65.94 | 67.86 |
| EER90860 | Sorghum | extracellular, golgi, plasma membrane | 65.94 | 67.71 |
| CDY70289 | Canola | extracellular | 57.92 | 67.25 |
| KRG93684 | Soybean | extracellular, vacuole | 66.16 | 67.18 |
| AT3G29810.1 | Thale cress | extracellular | 63.77 | 66.67 |
| KRH18352 | Soybean | plasma membrane | 65.73 | 66.16 |
| EER90859 | Sorghum | extracellular | 60.3 | 65.41 |
| AT3G02210.1 | Thale cress | extracellular | 63.99 | 65.27 |
| Bra040587.1-P | Field mustard | extracellular | 62.04 | 65.15 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 64.43 | 65.13 |
| CDX87193 | Canola | plasma membrane | 64.21 | 64.91 |
| CDY02184 | Canola | plasma membrane | 64.21 | 64.77 |
| CDY16831 | Canola | plasma membrane | 64.21 | 64.63 |
| Bra039163.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 63.77 | 64.62 |
| Bra012996.1-P | Field mustard | plasma membrane | 63.99 | 64.55 |
| CDY43250 | Canola | plasma membrane | 63.77 | 64.33 |
| CDY60470 | Canola | plasma membrane | 63.77 | 64.19 |
| CDY58691 | Canola | plasma membrane | 63.77 | 64.19 |
| Bra035951.1-P | Field mustard | plasma membrane | 63.56 | 63.97 |
| Bra029346.1-P | Field mustard | cytosol, plasma membrane, plastid | 16.49 | 61.79 |
| EER94687 | Sorghum | extracellular | 59.22 | 61.21 |
| CDY42842 | Canola | cytosol | 16.05 | 60.66 |
| EER99679 | Sorghum | plasma membrane | 57.05 | 58.97 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 10.63 | 57.65 |
| KRH56778 | Soybean | extracellular | 24.3 | 53.59 |
| CDY29033 | Canola | cytosol | 20.39 | 51.65 |
| KXG26803 | Sorghum | extracellular, plasma membrane | 47.29 | 48.77 |
| CDY14723 | Canola | cytosol | 25.38 | 36.79 |
| KXG36369 | Sorghum | mitochondrion | 25.81 | 17.68 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 25.16 | 17.31 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 24.08 | 16.79 |
Protein Annotations
| MapMan:21.1.2.2 | UniProt:A0A1Z5S8Z3 | InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| EnsemblPlants:OQU92393 | ProteinID:OQU92393 | ProteinID:OQU92393.1 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 |
| PANTHER:PTHR31673 | PANTHER:PTHR31673:SF21 | EnsemblPlantsGene:SORBI_3001G336600 | SignalP:SignalP-noTM | UniParc:UPI000B8B974B | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:62488833..62492706
Molecular Weight (calculated)
51455.9 Da
IEP (calculated)
8.708
GRAVY (calculated)
-0.107
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MARLRLLLLR HLAAAAALLA GFSSLPPLAE AYDPLDPNGN ITIKWDIIQW TSDGYVAVVS IYNYHKYRHI QAPGWNLGWV WAKKEIIWTI VGGQTTEQGD
101: CSQFKGSIPH CCKRDPAVVD LLPGTPYNMQ DANCCKGGVL NSWVQDPVSA VASFQISVGR SGTTNYTVKA PLNFTLKAPG PGYSCGVAHV VKPPTKFISQ
201: DGRRTTQAHV TWNVTCTYSQ FVAQRAPTCC VSLSSFYNET IVNCPKCSCG CQNTRPGSCV EGDSPYLASV VNGPGKSSMT PLVQCTPHMC PIRVHWHVKL
301: NYREYWRVKI TVTNWNYRMN YSQWNLVVQH PNFDKVTTIF SFNYKPLNPY GVINDTGMLW GIKYYNDLLM VAGPDGNVQS ELLFRKDPST FTFEKGWAFP
401: RRIYFNGDSC VMPPPDAYPW LPNSSPVLLL KSSSLVLPIV IWTAMLFLRL GKDDPGVLNL M
101: CSQFKGSIPH CCKRDPAVVD LLPGTPYNMQ DANCCKGGVL NSWVQDPVSA VASFQISVGR SGTTNYTVKA PLNFTLKAPG PGYSCGVAHV VKPPTKFISQ
201: DGRRTTQAHV TWNVTCTYSQ FVAQRAPTCC VSLSSFYNET IVNCPKCSCG CQNTRPGSCV EGDSPYLASV VNGPGKSSMT PLVQCTPHMC PIRVHWHVKL
301: NYREYWRVKI TVTNWNYRMN YSQWNLVVQH PNFDKVTTIF SFNYKPLNPY GVINDTGMLW GIKYYNDLLM VAGPDGNVQS ELLFRKDPST FTFEKGWAFP
401: RRIYFNGDSC VMPPPDAYPW LPNSSPVLLL KSSSLVLPIV IWTAMLFLRL GKDDPGVLNL M
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.