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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70289 Canola extracellular 90.43 100.0
Bra025406.1-P Field mustard extracellular 86.1 86.7
AT3G29810.1 Thale cress extracellular 84.05 83.67
KRH01360 Soybean extracellular, golgi, plasma membrane 72.44 70.98
KRH45084 Soybean extracellular, golgi, plasma membrane 71.98 70.54
KRH72178 Soybean mitochondrion 59.23 70.46
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 71.07 68.57
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 70.39 67.47
Zm00001d031479_P001 Maize cytosol, mitochondrion 25.06 67.07
Zm00001d013256_P001 Maize extracellular 68.56 67.04
Bra012996.1-P Field mustard plasma membrane 69.7 66.96
Os07t0604300-01 Rice extracellular 67.88 66.82
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 69.25 66.52
KRG93684 Soybean extracellular, vacuole 68.79 66.52
EER90860 Sorghum extracellular, golgi, plasma membrane 67.88 66.37
Os05t0386800-01 Rice extracellular 69.02 66.3
TraesCS6A01G379800.1 Wheat extracellular 67.43 66.22
TraesCS6B01G418400.1 Wheat extracellular 67.2 66.0
TraesCS6D01G364400.1 Wheat extracellular 67.2 66.0
Os03t0754500-00 Rice extracellular 32.12 65.89
Bra035951.1-P Field mustard plasma membrane 68.56 65.72
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 67.43 65.49
EER97506 Sorghum extracellular, plasma membrane 68.11 65.28
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 67.88 65.21
KRH18352 Soybean plasma membrane 67.88 65.07
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 67.65 64.99
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 67.65 64.99
GSMUA_Achr2P06240_001 Banana mitochondrion 69.25 63.73
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 66.51 63.48
HORVU5Hr1G095910.12 Barley extracellular, vacuole 66.06 63.04
EER90859 Sorghum extracellular 60.82 62.82
OQU92393 Sorghum extracellular 65.15 62.04
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 17.31 61.79
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 61.05 61.75
TraesCS3A01G409900.1 Wheat plastid 38.72 61.37
Os03t0416300-01 Rice extracellular 64.01 61.35
Bra008684.1-P Field mustard extracellular 52.85 59.95
TraesCS2A01G175100.1 Wheat extracellular 61.28 59.38
TraesCS4A01G231200.1 Wheat extracellular 61.96 59.13
TraesCS2D01G182500.1 Wheat golgi 61.05 58.9
TraesCS4D01G082700.1 Wheat extracellular 61.73 58.79
TraesCS4B01G084800.1 Wheat extracellular 60.36 58.24
HORVU4Hr1G014530.1 Barley extracellular 61.28 58.1
TraesCS2B01G201500.1 Wheat plasma membrane 59.45 56.86
HORVU2Hr1G033070.14 Barley mitochondrion 60.82 56.81
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 26.65 56.8
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 53.99 56.7
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 60.82 56.57
Os10t0497700-01 Rice extracellular 54.21 56.0
TraesCS5B01G397000.2 Wheat extracellular 28.93 55.95
TraesCS5D01G402000.1 Wheat extracellular 28.7 55.26
TraesCS3D01G404800.2 Wheat plasma membrane 56.95 54.7
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 33.26 52.33
Bra035948.1-P Field mustard cytosol 11.39 51.55
Bra030800.1-P Field mustard cytosol 48.75 51.32
Bra019992.1-P Field mustard cytosol 43.74 48.36
Bra035768.1-P Field mustard mitochondrion, peroxisome, plastid 17.77 20.53
Bra020151.1-P Field mustard cytosol 11.62 19.69
Bra033528.1-P Field mustard plasma membrane 27.33 18.21
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.42 17.39
Bra026378.1-P Field mustard extracellular, golgi, vacuole 25.74 17.3
Bra036147.1-P Field mustard plasma membrane 25.97 17.22
Bra023941.1-P Field mustard plasma membrane 25.97 16.96
Bra001795.1-P Field mustard endoplasmic reticulum, vacuole 25.74 16.92
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 25.51 16.89
Protein Annotations
MapMan:21.1.2.2EnsemblPlantsGene:Bra040587EnsemblPlants:Bra040587.1EnsemblPlants:Bra040587.1-PInterPro:COBRA_plnGO:GO:0000003
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005886
GO:GO:0005975GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009664
GO:GO:0009791GO:GO:0009832GO:GO:0009987GO:GO:0010214GO:GO:0010215GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007GO:GO:0046658
GO:GO:0048316GO:GO:0048354GO:GO:0052324UniProt:M4FHK9PFAM:PD140986PFAM:PF04833
PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000253E6DB
SEG:seg:::::
Description
AT3G29810 (E=1e-227) COBL2 | COBL2 (COBRA-LIKE PROTEIN 2 PRECURSOR)
Coordinates
chrScaffold000221:-:23551..26203
Molecular Weight (calculated)
49389.3 Da
IEP (calculated)
9.151
GRAVY (calculated)
-0.187
Length
439 amino acids
Sequence
(BLAST)
001: MKILLSKFSV LFLFLLSWTS FTTTEAYDAL DPTGNITIKW DILSWTPDGY VARVTIFNYQ QYRHIESPGW QLGWTWLKKE VIWNMVGAQA TEQGDCSKFK
101: GDPPHCCKKT PTVVDLLPGT PYNHQISNCC RGGVVSAWAQ DSATAVSAFQ ISVGQSGTTN TTVRAPRNIT LKAPGPGYTC GPAKTVAPTK FFSDDKRRKT
201: QAMLTWNMTC TYSQFLAKKS PTCCVSLSSF YNETIVPCPT CSCGCQNNSQ TGTCVNQKIA SVIQASGKNN HQPLLQCTQH MCPIRVHWHV KTNYKEYWRV
301: KVAITNFNYN MNYSLWNMVA QHPNFDNVTK LFSFNYKPLS PYAGINDTAI LWGIKFYNDM LSQAGPLGNV QSEILFRKSP SKFTLDKGWA FPRRIYFNGD
401: NCVMPPPDSY PWLPNATPKL ATSPFIVLLI TFFSVLILM
Best Arabidopsis Sequence Match ( AT3G29810.1 )
(BLAST)
001: MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
Arabidopsis Description
COBL3COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.