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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 7
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 99.4 99.4
AT3G16860.1 Thale cress plasma membrane 73.31 74.89
Bra033528.1-P Field mustard plasma membrane 68.07 68.89
PGSC0003DMT400065836 Potato cytosol 42.88 60.98
KRH50776 Soybean endoplasmic reticulum, vacuole 58.62 60.81
KRH02312 Soybean endoplasmic reticulum, extracellular 58.62 60.71
VIT_05s0077g01470.t01 Wine grape plasma membrane 57.87 59.29
Bra036147.1-P Field mustard plasma membrane 57.87 58.31
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 56.37 57.76
Solyc01g065530.2.1 Tomato nucleus, plastid 56.07 57.72
VIT_07s0005g01020.t01 Wine grape plasma membrane 54.72 56.41
KRH37033 Soybean extracellular 53.97 55.38
Solyc09g075540.1.1 Tomato plasma membrane 52.92 54.14
Bra035768.1-P Field mustard mitochondrion, peroxisome, plastid 28.34 49.74
GSMUA_AchrUn_... Banana plasma membrane 49.18 49.18
EER95000 Sorghum endoplasmic reticulum, extracellular, plasma membrane 48.73 48.51
TraesCS4B01G187300.1 Wheat golgi 48.43 48.43
Zm00001d028826_P001 Maize plasma membrane 48.43 48.43
GSMUA_Achr11P... Banana plasma membrane 48.88 48.22
TraesCS4A01G117100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 48.28 47.85
TraesCS4D01G188600.1 Wheat golgi 48.28 47.85
Os03t0301200-01 Rice extracellular, plasma membrane, vacuole 48.13 47.84
OQU90545 Sorghum extracellular, plasma membrane, vacuole 46.33 46.75
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 45.73 46.64
Bra001795.1-P Field mustard endoplasmic reticulum, vacuole 46.03 45.96
Bra023941.1-P Field mustard plasma membrane 45.58 45.24
GSMUA_Achr8P10390_001 Banana cytosol 16.79 44.8
TraesCS2B01G107700.1 Wheat plasma membrane 44.08 44.61
TraesCS2D01G092100.1 Wheat plasma membrane 43.63 44.09
Os07t0690900-01 Rice plasma membrane 44.38 43.85
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 43.33 43.72
Bra020151.1-P Field mustard cytosol 16.79 43.24
Bra026378.1-P Field mustard extracellular, golgi, vacuole 41.83 42.73
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 42.28 42.53
HORVU2Hr1G015440.1 Barley cytosol 34.63 41.92
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.33 41.76
HORVU4Hr1G054770.1 Barley plastid 47.68 40.25
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 19.04 29.26
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 18.74 27.47
Bra025406.1-P Field mustard extracellular 17.84 27.29
Bra030800.1-P Field mustard cytosol 16.64 26.62
Bra040587.1-P Field mustard extracellular 17.39 26.42
Bra008684.1-P Field mustard extracellular 14.99 25.84
Bra012996.1-P Field mustard plasma membrane 17.69 25.82
Bra035951.1-P Field mustard plasma membrane 17.24 25.11
Bra019992.1-P Field mustard cytosol 14.69 24.69
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 4.35 23.58
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 6.9 22.33
Bra035948.1-P Field mustard cytosol 2.85 19.59
Protein Annotations
EnsemblPlants:Bra021208.1EnsemblPlants:Bra021208.1-PEnsemblPlantsGene:Bra021208GO:GO:0005575GO:GO:0008150GO:GO:0009987
GO:GO:0010215GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
InterPro:COBRA_plnPANTHER:PTHR31052PANTHER:PTHR31052:SF3PFAM:PD140986PFAM:PF04833SEG:seg
SignalP:SignalP-noTMUniParc:UPI00025439D8UniProt:M4DXG2MapMan:21.1.2.2::
Description
AT3G16860 (E=5e-282) COBL8 | COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR)
Coordinates
chrA01:+:23350744..23353152
Molecular Weight (calculated)
72739.0 Da
IEP (calculated)
7.896
GRAVY (calculated)
-0.167
Length
667 amino acids
Sequence
(BLAST)
001: MILMGLAPKL ILLLSLFTTI QLTSSQPRQR SNDSTPPPPP TPPSPPPISP DAVLCNGIFV SYTYSTGTQI KPNDTKSQPY RFESVITVLN NGRDELKSWL
101: VFVGFAHKEI LVSASNAILE DGSSLPVSVE NGTTFAGYPA ADLKSAIMTA GDIKQMEARV ELVGTQFGVA PPGIPLPNNI TLVNDGWSCP KATKRDGNIL
201: EVCCMPDPKN ETDPIGEKLK PRQKGDLTIM YDIIRPYATS YWAQVTIENH NPLGRLDNWD LSFEWTKDEF ISQTKGAYPS VVDASACIDG PQGKHYDAVD
301: FSTVLSCARK PHIIDLPLTK YNDSNLGLKP YCCRNGTILS PSMDPTKSKS VFQMEVYKMP PNLNISAIAP PLSWKIKGNF NPDYKCGPPA RVSLSEFPDP
401: SGLPSNRTAF ASWQVACNIT QPVTPSCCVS FSSYLNDSII PCNTCACSDC SSKRVDKTCS TTSPALLLPP QALLIPFENR TKFAASWANL KHRKVPTLLP
501: CGDYCGVSIN WHLATDYHRG WSARITIFNW GGTNFADWSA AVELKNAAPD FEKAYSFNAT TVAVDGKNTT VLMEGLPGLN YLVAEVDAKN PSKDYRVPGK
601: QQSVISFTKK LNPGIKVGAG EGFPTKVFFN GQECSLPSII PSNGHKGRVS TFLLMVLPVF ALLSLWV
Best Arabidopsis Sequence Match ( AT3G16860.1 )
(BLAST)
001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
Arabidopsis Description
COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.