Factsheet for HORVU4Hr1G054770.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	81.27	95.39
TraesCS4B01G187300.1	Wheat	golgi	80.13	94.9
TraesCS4D01G188600.1	Wheat	golgi	80.76	94.8
Zm00001d028826_P001	Maize	plasma membrane	72.28	85.61
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	71.77	84.63
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	70.0	82.41
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	51.65	61.72
GSMUA_AchrUn_...	Banana	plasma membrane	49.49	58.62
GSMUA_Achr11P...	Banana	plasma membrane	49.49	57.84
HORVU2Hr1G015440.1	Barley	cytosol	38.86	55.72
PGSC0003DMT400065836	Potato	cytosol	33.04	55.65
KRH02312	Soybean	endoplasmic reticulum, extracellular	44.81	54.97
KRH50776	Soybean	endoplasmic reticulum, vacuole	44.68	54.9
VIT_05s0077g01470.t01	Wine grape	plasma membrane	44.3	53.76
CDY34424	Canola	plasma membrane	43.54	52.2
Bra033528.1-P	Field mustard	plasma membrane	43.42	52.05
CDY32210	Canola	plasma membrane	43.29	51.82
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	42.66	50.98
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	41.65	50.54
Solyc01g065530.2.1	Tomato	nucleus, plastid	41.14	50.15
KRH37033	Soybean	extracellular	41.01	49.85
Solyc09g075540.1.1	Tomato	plasma membrane	40.89	49.54
VIT_07s0005g01020.t01	Wine grape	plasma membrane	40.38	49.3
AT3G16860.1	Thale cress	plasma membrane	40.63	49.16
Bra036147.1-P	Field mustard	plasma membrane	40.76	48.64
CDY49611	Canola	plasma membrane	40.76	48.64
CDY00037	Canola	plasma membrane	40.63	48.49
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.63	48.27
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	40.38	48.11
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.38	47.83
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.25	47.68
GSMUA_Achr8P10390_001	Banana	cytosol	14.81	46.8
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	39.62	46.58
HORVU4Hr1G014530.1	Barley	extracellular	15.32	26.13
HORVU5Hr1G095910.12	Barley	extracellular, vacuole	15.19	26.09
HORVU5Hr1G096010.13	Barley	endoplasmic reticulum	9.11	25.81
HORVU2Hr1G033060.13	Barley	mitochondrion	14.56	25.73
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	14.68	24.58
HORVU2Hr1G033070.14	Barley	mitochondrion	14.18	23.83
HORVU3Hr1G007580.2	Barley	extracellular	11.27	23.73
HORVU3Hr1G009960.1	Barley	plastid	6.46	23.39
HORVU0Hr1G004650.3	Barley	mitochondrion	12.28	23.37
HORVU2Hr1G033080.1	Barley	extracellular	4.56	19.57
HORVU2Hr1G092510.1	Barley	mitochondrion	7.47	18.44

Protein Annotations

EnsemblPlants:HORVU4Hr1G054770.1	EnsemblPlantsGene:HORVU4Hr1G054770	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31052	PANTHER:PTHR31052:SF10	PFAM:PD140986	PFAM:PF04833	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B4655AB	UniProt:A0A287P403	MapMan:21.1.2.2	:	:

Description

No Description!

Coordinates

chrchr4H:+:458023418..458026275

Molecular Weight (calculated)

84895.5 Da

IEP (calculated)

8.269

GRAVY (calculated)

-0.148

Length

790 amino acids

Sequence
(BLAST)

001: RSPPVNQSSG HAPPLSPTSP PLRPASLSTP FCSNRENPVH LCLPSRNSEN KTTRTRRERG SSKASRGRTH AAPPVQTHHP PRLPQLCHAL SNRLIYLLPR
101: PALPRSPQIA SSLADPAMVG SIAAQAVVIG AILLLAGLAA AQQTPRAPAA AVAPAPDPGC NGIQLTYILQ SREKIRPFVS DRNKQPYSFK ANASVLNGGT
201: RPLRSWAMLV TFGHDEILVG VGGAVLTGGA ELPYNTTEAA GNATSFSGYP QTDLLTPIAT AGDMTQIQAS VGLVGTLFAG PLGLVPDPLP TALSLDDPDY
301: KCPAATNVTA TMFTTCCLLT PEAEANVTVI DANSTDPTKS FLPRGTGDLV ITYDVVQAYP TSYLALVTLE NNAKLGRLDN WRLSWEWRRG EFIYSMKGAH
401: PLAVDVSNCI YGAPGQYYQS LDFSQVLNCQ KKPVILDLPL SRYNDTQMGK IEHCCRNGTI LPKSMDAAQS KSAFQMQVFK MPPDTNRTML FPPANFKISG
501: GSSLNPDYAC GQPVPVSPTG FPDPSGLDST TLAVATWQVV CNITTAKGAK PKCCVTFSAH YNDSVIPCNT CACGCPSNRR GPTCSTTAPS MLLPPEALLV
601: PFDNRTQKAQ AWAQLKHYNV PRPMPCGDFC GVSINWHVSS DFNKGWSARV TLFNWGDVDM ANWFAAMVMD KAYDGFEKAY SFNATAEGNN TIFMQGLEGL
701: NYLVKQTNMS GSDYLVPGKQ QSVLSFTKKP TPDIDVVAGD GFPTKVFFNG DECAMPQRFP IKSDGFRTHL SSALALVLLM AASALLLLQQ

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.