Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- plastid 1
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32210 | Canola | plasma membrane | 86.99 | 87.12 |
| Bra033528.1-P | Field mustard | plasma membrane | 86.54 | 86.8 |
| CDY34424 | Canola | plasma membrane | 86.38 | 86.65 |
| AT3G16860.1 | Thale cress | plasma membrane | 73.68 | 74.58 |
| VIT_05s0077g01470.t01 | Wine grape | plasma membrane | 65.51 | 66.51 |
| PGSC0003DMT400065836 | Potato | cytosol | 46.9 | 66.1 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 63.39 | 65.16 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 62.93 | 64.6 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 63.24 | 63.05 |
| PGSC0003DMT400065840 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 61.27 | 62.21 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 60.67 | 61.88 |
| VIT_07s0005g01020.t01 | Wine grape | plasma membrane | 59.46 | 60.74 |
| KRH37033 | Soybean | extracellular | 58.4 | 59.38 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 58.4 | 59.2 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 54.61 | 54.12 |
| GSMUA_Achr11P... | Banana | plasma membrane | 54.46 | 53.25 |
| TraesCS4B01G187300.1 | Wheat | golgi | 51.44 | 50.97 |
| Zm00001d028826_P001 | Maize | plasma membrane | 51.44 | 50.97 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 51.29 | 50.6 |
| TraesCS4D01G188600.1 | Wheat | golgi | 51.29 | 50.37 |
| TraesCS4A01G117100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.13 | 50.22 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 50.83 | 50.07 |
| Zm00001d007208_P001 | Maize | extracellular, plasma membrane, vacuole | 49.02 | 49.54 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 50.23 | 49.4 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 49.02 | 49.02 |
| TraesCS2B01G107700.1 | Wheat | plasma membrane | 47.05 | 47.19 |
| AT4G27110.1 | Thale cress | extracellular | 47.35 | 46.86 |
| Os07t0690900-01 | Rice | plasma membrane | 47.81 | 46.81 |
| GSMUA_Achr8P10390_001 | Banana | cytosol | 17.55 | 46.4 |
| TraesCS2D01G092100.1 | Wheat | plasma membrane | 46.29 | 46.36 |
| HORVU0Hr1G030030.1 | Barley | extracellular, plasma membrane | 46.29 | 46.29 |
| HORVU2Hr1G015440.1 | Barley | cytosol | 37.07 | 44.46 |
| TraesCS2A01G092900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 46.44 | 44.36 |
| HORVU4Hr1G054770.1 | Barley | plastid | 50.98 | 42.66 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 19.52 | 29.93 |
| AT1G09790.1 | Thale cress | plasma membrane | 19.06 | 27.75 |
| AT3G29810.1 | Thale cress | extracellular | 18.31 | 27.44 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 18.46 | 26.75 |
| AT3G02210.1 | Thale cress | extracellular | 18.15 | 26.55 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 7.72 | 25.0 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:827298 | ProteinID:AEE83695.1 | EMBL:AK117261 | ArrayExpress:AT4G16120 | EnsemblPlantsGene:AT4G16120 |
| RefSeq:AT4G16120 | TAIR:AT4G16120 | RefSeq:AT4G16120-TAIR-G | EnsemblPlants:AT4G16120.1 | TAIR:AT4G16120.1 | Symbol:ATSEB1 |
| Unigene:At.182 | EMBL:BT005903 | ProteinID:CAB10391.1 | ProteinID:CAB78654.1 | InterPro:COBRA_pln | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | GO:GO:0046658 | RefSeq:NP_567484.1 |
| PFAM:PD140986 | PFAM:PF04833 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31052 |
| PANTHER:PTHR31052:SF3 | UniProt:Q8GZ17 | SignalP:SignalP-noTM | UniParc:UPI00000AD02F | EMBL:Y14423 | SEG:seg |
Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
Coordinates
chr4:-:9116209..9119379
Molecular Weight (calculated)
72605.5 Da
IEP (calculated)
7.631
GRAVY (calculated)
-0.225
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.