Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49611 | Canola | plasma membrane | 86.58 | 86.71 |
| CDY00037 | Canola | plasma membrane | 86.43 | 86.56 |
| Bra036147.1-P | Field mustard | plasma membrane | 86.12 | 86.25 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 63.05 | 63.24 |
| AT3G16860.1 | Thale cress | plasma membrane | 58.52 | 59.42 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 49.32 | 49.03 |
| GSMUA_Achr11P... | Banana | plasma membrane | 49.47 | 48.52 |
| Zm00001d028826_P001 | Maize | plasma membrane | 48.42 | 48.13 |
| TraesCS4A01G117100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.57 | 47.85 |
| TraesCS4B01G187300.1 | Wheat | golgi | 48.11 | 47.83 |
| TraesCS4D01G188600.1 | Wheat | golgi | 48.42 | 47.7 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 48.27 | 47.69 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 47.96 | 47.46 |
| GSMUA_Achr8P10390_001 | Banana | cytosol | 17.65 | 46.8 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 46.91 | 46.28 |
| Zm00001d007208_P001 | Maize | extracellular, plasma membrane, vacuole | 44.65 | 45.26 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 44.8 | 44.93 |
| TraesCS2B01G107700.1 | Wheat | plasma membrane | 44.49 | 44.76 |
| TraesCS2D01G092100.1 | Wheat | plasma membrane | 44.19 | 44.39 |
| Os07t0690900-01 | Rice | plasma membrane | 45.1 | 44.3 |
| HORVU0Hr1G030030.1 | Barley | extracellular, plasma membrane | 44.04 | 44.18 |
| AT4G27110.1 | Thale cress | extracellular | 44.49 | 44.16 |
| HORVU2Hr1G015440.1 | Barley | cytosol | 35.44 | 42.65 |
| TraesCS2A01G092900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 44.34 | 42.49 |
| HORVU4Hr1G054770.1 | Barley | plastid | 48.11 | 40.38 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 18.85 | 29.0 |
| AT1G09790.1 | Thale cress | plasma membrane | 18.4 | 26.87 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 18.4 | 26.75 |
| AT3G29810.1 | Thale cress | extracellular | 17.65 | 26.53 |
| AT3G02210.1 | Thale cress | extracellular | 17.35 | 25.44 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 7.09 | 23.04 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:834987 | UniProt:A0A178URZ2 | ProteinID:AED95791.1 | EMBL:AK228315 | ArrayExpress:AT5G49270 |
| EnsemblPlantsGene:AT5G49270 | RefSeq:AT5G49270 | TAIR:AT5G49270 | RefSeq:AT5G49270-TAIR-G | EnsemblPlants:AT5G49270.1 | TAIR:AT5G49270.1 |
| Unigene:At.29795 | ProteinID:BAB10345.1 | EMBL:BT008328 | InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009932 | GO:GO:0009987 |
| GO:GO:0010053 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0030154 | GO:GO:0031225 | GO:GO:0040007 | GO:GO:0048765 | RefSeq:NP_199738.1 | ProteinID:OAO95471.1 |
| PFAM:PD140986 | PFAM:PF04833 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000256 |
| PO:PO:0000262 | PO:PO:0001078 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR31052 | PANTHER:PTHR31052:SF3 | UniProt:Q0WRJ1 | UniProt:Q9FJ13 | Symbol:SHV2 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0000048C33 | SEG:seg | : | : | : |
Description
COBL9COBRA-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ13]
Coordinates
chr5:-:19971884..19974530
Molecular Weight (calculated)
73139.7 Da
IEP (calculated)
5.399
GRAVY (calculated)
0.030
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLLPIFFG VLLLFTVTPP SMSQLPPTIM VPAPAPAPIS PSDLCNGIFL SYDFILGRKI PPNDTADQPY RFESVLTVLN NGREELKEWR VFVGFQHNEI
101: LISATDALIV NGTELPALVG NGTIFGGYPV SDLKTAIQTA GDLKQMTAEI ELVGTQFMVA PPAVPLPSNI SLVNEGWLCP VPTLQSKREL TTCCIRDASI
201: IVNTTITTKF LPRQPGDLTI MYDVIRAYDQ NYLTEVTMEN HNPLGRLDHW ELSFDWMRDE FIQKMQGAYP TVVDATKCIF GPQSLIYTGL DFADVLTCER
301: RPIIIDLPPT KKDDSTLGNI PSCCRNGTIL PRIMDPSKSV SVFTMQVAKM PPDFNRSALF PPQNWRIKGT LNPDYSCGPP VRVTPTFYPD PSGMPTNKSS
401: FASWQIVCNI TQAKTEIPKC CVSFSAFFND SIIPCNTCAC GCVSETRRTC SAETPSLLIP PDALLLPFEN RTALTLAWNA LKHKTLPNPM PCGDNCGVSI
501: NWHMASDYRG GWTVRITIFN WGEIDFPNWF LAVQMKKPAL LGFEKAYSFN ASLLSVDGGV NNTIFMEGLP GLDYLVAEAD EKDPKKKNIR IPGKQQSVIQ
601: FSKKLTPGIN VAERDGFPAK VIFNGEECLL PDLLPMASGG RRNGAITVLS FITFYVAAFM VLL
101: LISATDALIV NGTELPALVG NGTIFGGYPV SDLKTAIQTA GDLKQMTAEI ELVGTQFMVA PPAVPLPSNI SLVNEGWLCP VPTLQSKREL TTCCIRDASI
201: IVNTTITTKF LPRQPGDLTI MYDVIRAYDQ NYLTEVTMEN HNPLGRLDHW ELSFDWMRDE FIQKMQGAYP TVVDATKCIF GPQSLIYTGL DFADVLTCER
301: RPIIIDLPPT KKDDSTLGNI PSCCRNGTIL PRIMDPSKSV SVFTMQVAKM PPDFNRSALF PPQNWRIKGT LNPDYSCGPP VRVTPTFYPD PSGMPTNKSS
401: FASWQIVCNI TQAKTEIPKC CVSFSAFFND SIIPCNTCAC GCVSETRRTC SAETPSLLIP PDALLLPFEN RTALTLAWNA LKHKTLPNPM PCGDNCGVSI
501: NWHMASDYRG GWTVRITIFN WGEIDFPNWF LAVQMKKPAL LGFEKAYSFN ASLLSVDGGV NNTIFMEGLP GLDYLVAEAD EKDPKKKNIR IPGKQQSVIQ
601: FSKKLTPGIN VAERDGFPAK VIFNGEECLL PDLLPMASGG RRNGAITVLS FITFYVAAFM VLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.