Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008684.1-P | Field mustard | extracellular | 83.06 | 92.51 |
| Bra023528.1-P | Field mustard | extracellular, plasma membrane, vacuole | 92.58 | 91.94 |
| CDX90983 | Canola | extracellular | 92.34 | 91.49 |
| CDX69511 | Canola | plasma membrane | 94.2 | 89.23 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 92.11 | 87.06 |
| CDY26444 | Canola | plastid | 71.23 | 83.88 |
| KRH45086 | Soybean | plasma membrane | 80.97 | 80.97 |
| KRH01361 | Soybean | extracellular, plasma membrane, vacuole | 80.97 | 80.97 |
| KRG93686 | Soybean | extracellular, plasma membrane, vacuole | 80.51 | 80.51 |
| VIT_14s0083g01150.t01 | Wine grape | plasma membrane | 80.05 | 80.05 |
| KRH18350 | Soybean | cytosol | 32.95 | 79.78 |
| PGSC0003DMT400082702 | Potato | extracellular | 45.48 | 79.03 |
| PGSC0003DMT400003723 | Potato | extracellular | 79.35 | 78.8 |
| PGSC0003DMT400002674 | Potato | plasma membrane | 77.49 | 76.96 |
| GSMUA_Achr4P03210_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 77.03 | 74.27 |
| GSMUA_Achr4P14440_001 | Banana | plasma membrane | 76.33 | 71.83 |
| EER94687 | Sorghum | extracellular | 71.93 | 69.51 |
| EER99679 | Sorghum | plasma membrane | 71.69 | 69.28 |
| TraesCS5D01G107900.1 | Wheat | extracellular | 71.93 | 69.04 |
| TraesCS5A01G095200.1 | Wheat | extracellular | 71.69 | 68.82 |
| TraesCS5B01G101400.1 | Wheat | extracellular | 71.69 | 68.67 |
| TraesCS2D01G182400.1 | Wheat | plasma membrane | 71.0 | 68.46 |
| TraesCS2A01G175000.1 | Wheat | plasma membrane | 71.23 | 68.37 |
| Zm00001d022082_P001 | Maize | extracellular, plasma membrane, vacuole | 70.77 | 68.23 |
| Zm00001d047276_P001 | Maize | plasma membrane | 71.23 | 68.22 |
| TraesCS2B01G201400.1 | Wheat | plasma membrane | 70.77 | 68.08 |
| HORVU3Hr1G007580.2 | Barley | extracellular | 58.93 | 67.73 |
| Os07t0604400-00 | Rice | extracellular | 69.14 | 66.08 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 71.23 | 65.6 |
| HORVU3Hr1G009960.1 | Barley | plastid | 32.95 | 65.14 |
| HORVU2Hr1G033060.13 | Barley | mitochondrion | 66.13 | 63.76 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 67.05 | 63.38 |
| AT3G29810.1 | Thale cress | extracellular | 64.27 | 62.81 |
| AT3G02210.1 | Thale cress | extracellular | 65.2 | 62.17 |
| TraesCSU01G047200.1 | Wheat | plastid | 33.41 | 62.07 |
| TraesCS3D01G047900.1 | Wheat | plastid | 35.27 | 61.04 |
| HORVU0Hr1G004650.3 | Barley | mitochondrion | 57.08 | 59.28 |
| HORVU2Hr1G033080.1 | Barley | extracellular | 23.2 | 54.35 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 23.67 | 50.0 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 92.34 | 46.39 |
| AT1G09790.1 | Thale cress | plasma membrane | 47.1 | 44.71 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.93 | 19.52 |
| AT3G16860.1 | Thale cress | plasma membrane | 28.77 | 18.99 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 29.0 | 18.85 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 28.77 | 18.45 |
| AT4G27110.1 | Thale cress | extracellular | 28.07 | 18.11 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:831417 | ProteinID:AED92186.1 | ProteinID:ANM69893.1 | ProteinID:ANM69894.1 | ProteinID:ANM69895.1 |
| ArrayExpress:AT5G15630 | EnsemblPlantsGene:AT5G15630 | RefSeq:AT5G15630 | TAIR:AT5G15630 | RefSeq:AT5G15630-TAIR-G | EnsemblPlants:AT5G15630.1 |
| TAIR:AT5G15630.1 | EMBL:BT014900 | EMBL:BT020445 | ProteinID:CAC01762.1 | Symbol:COBL4 | InterPro:COBRA_pln |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009834 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | RefSeq:NP_001331538.1 | RefSeq:NP_001331539.1 |
| RefSeq:NP_001331540.1 | RefSeq:NP_197067.2 | ProteinID:OAO93121.1 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF2 |
| UniProt:Q9LFW3 | SignalP:SignalP-noTM | UniParc:UPI0000196D5A | SEG:seg | : | : |
Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
Coordinates
chr5:+:5084524..5086811
Molecular Weight (calculated)
48517.4 Da
IEP (calculated)
9.082
GRAVY (calculated)
-0.177
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.