Factsheet for GSMUA_Achr4P14440_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	82.53	84.56
AT5G15630.1	Thale cress	extracellular, plasma membrane, vacuole	71.83	76.33
PGSC0003DMT400082702	Potato	extracellular	41.27	76.21
KRH45086	Soybean	plasma membrane	71.62	76.1
KRH01361	Soybean	extracellular, plasma membrane, vacuole	71.18	75.64
KRH18350	Soybean	cytosol	29.26	75.28
KRG93686	Soybean	extracellular, plasma membrane, vacuole	70.74	75.17
VIT_14s0083g01150.t01	Wine grape	plasma membrane	70.09	74.48
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	70.52	74.42
Solyc03g070440.2.1	Tomato	extracellular	69.43	73.78
PGSC0003DMT400002674	Potato	plasma membrane	69.87	73.73
Bra008684.1-P	Field mustard	extracellular	62.23	73.64
EER94687	Sorghum	extracellular	71.18	73.09
PGSC0003DMT400003723	Potato	extracellular	69.21	73.04
Zm00001d047276_P001	Maize	plasma membrane	71.4	72.67
Solyc02g089130.2.1	Tomato	extracellular	68.78	72.58
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	70.74	72.48
EER99679	Sorghum	plasma membrane	70.31	72.2
TraesCS5A01G095200.1	Wheat	extracellular	70.09	71.49
TraesCS5D01G107900.1	Wheat	extracellular	70.09	71.49
TraesCS2D01G182400.1	Wheat	plasma membrane	69.65	71.36
Solyc03g114900.2.1	Tomato	extracellular	69.65	71.36
TraesCS5B01G101400.1	Wheat	extracellular	70.09	71.33
TraesCS2B01G201400.1	Wheat	plasma membrane	69.43	70.98
HORVU3Hr1G007580.2	Barley	extracellular	57.86	70.67
TraesCS2A01G175000.1	Wheat	plasma membrane	68.56	69.93
PGSC0003DMT400063055	Potato	extracellular, mitochondrion	69.43	69.89
HORVU3Hr1G009960.1	Barley	plastid	32.97	69.27
Os03t0416200-01	Rice	extracellular, golgi, plasma membrane	70.74	69.23
Os07t0604400-00	Rice	extracellular	66.81	67.85
HORVU2Hr1G033060.13	Barley	mitochondrion	64.41	66.0
TraesCSU01G047200.1	Wheat	plastid	32.97	65.09
TraesCS3D01G047900.1	Wheat	plastid	34.93	64.26
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	63.76	63.9
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	63.54	63.54
VIT_17s0000g05050.t01	Wine grape	cytosol	8.3	63.33
HORVU0Hr1G004650.3	Barley	mitochondrion	55.9	61.69
HORVU2Hr1G033080.1	Barley	extracellular	24.45	60.87
KRH63180	Soybean	plasma membrane	60.04	60.04
KRH54737	Soybean	plasma membrane	60.04	60.04
GSMUA_Achr2P06240_001	Banana	mitochondrion	62.01	59.54
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	24.02	53.4
CDY26445	Canola	cytosol	19.43	52.66
GSMUA_Achr4P27070_001	Banana	cytosol	46.94	51.93
AT5G60950.1	Thale cress	endoplasmic reticulum	22.71	50.98
Solyc02g064790.1.1	Tomato	extracellular, vacuole	7.21	47.83
VIT_17s0000g05060.t01	Wine grape	plasma membrane	73.36	36.09
GSMUA_Achr8P10390_001	Banana	cytosol	12.45	22.8
GSMUA_AchrUn_...	Banana	plasma membrane	27.95	19.19
GSMUA_Achr4P33540_001	Banana	vacuole	27.51	18.95
GSMUA_Achr11P...	Banana	plasma membrane	27.51	18.64
GSMUA_Achr3P21560_001	Banana	plasma membrane	25.76	17.99

Protein Annotations

EnsemblPlants:GSMUA_Achr4P14440_001	EnsemblPlants:GSMUA_Achr4T14440_001	EnsemblPlantsGene:GSMUA_Achr4G14440_001	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31673	PANTHER:PTHR31673:SF2	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00029681C2	UniProt:M0SNV9	MapMan:21.1.2.2	:

Description

COBRA-like protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G14440_001]

Coordinates

chr4:-:10794805..10796569

Molecular Weight (calculated)

51054.8 Da

IEP (calculated)

8.536

GRAVY (calculated)

-0.036

Length

458 amino acids

Sequence
(BLAST)

001: MELNQIGRPS RRYLAADDWS SCSLVLFISV LALMFSPAVA YDPLDPTGNI TIKWDVISWT ADGYVAVVTM NNFQMYRHIM SPGWTLGWTW AKKEVIWSMV
101: GAQATEQGDC SKFKANLPHC CKKTPAIVDL LPGVPYNQQI ANCCKGGVVG AYGQDPAAAV SAFQVSVGQS GTSNKTVKLP QNFTLLGPGL GYTCGPAKVV
201: PSTIFLTPDK RRKTQALMTW NVTCTYSQFL SSKHPTCCVS FSSFYNDTII PCRSCACGCE NKNCIKYAVC TTFSSGTPGI NTPKKDNAPL LQCTQHMCPI
301: RVHWHVKLNY KDYWRAKIAI TNFNYRMNYT LWTLVIQHPN LDNVTEVFSF DYKPLVPYGF INDTGMFYGM KYYNDLLMEA GAYGNVQSEL LLRKDASTFT
401: FKKGWAFPRK VYFNGDECMM PPPDAYPHLP NSSPVGAPPL ILHNLAVSVL ALILMVMW

Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)

001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W

Arabidopsis Description

COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.