Factsheet for GSMUA_Achr8P10390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065836	Potato	cytosol	47.6	25.37
GSMUA_Achr11P...	Banana	plasma membrane	57.2	21.15
GSMUA_AchrUn_...	Banana	plasma membrane	56.4	21.14
KRH50776	Soybean	endoplasmic reticulum, vacuole	51.2	19.91
KRH02312	Soybean	endoplasmic reticulum, extracellular	50.4	19.57
HORVU2Hr1G015440.1	Barley	cytosol	42.8	19.42
VIT_05s0077g01470.t01	Wine grape	plasma membrane	50.4	19.35
KRH37033	Soybean	extracellular	48.0	18.46
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	48.0	18.43
Solyc01g065530.2.1	Tomato	nucleus, plastid	47.6	18.36
VIT_07s0005g01020.t01	Wine grape	plasma membrane	46.4	17.93
CDY34424	Canola	plasma membrane	47.2	17.91
Bra033528.1-P	Field mustard	plasma membrane	47.2	17.91
CDY32210	Canola	plasma membrane	47.2	17.88
GSMUA_Achr3P21560_001	Banana	plasma membrane	46.8	17.84
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	46.4	17.74
Zm00001d028826_P001	Maize	plasma membrane	47.2	17.69
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	46.8	17.65
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	46.4	17.55
TraesCS4B01G187300.1	Wheat	golgi	46.8	17.54
Bra036147.1-P	Field mustard	plasma membrane	46.4	17.52
CDY00037	Canola	plasma membrane	46.4	17.52
CDY49611	Canola	plasma membrane	46.4	17.52
AT3G16860.1	Thale cress	plasma membrane	45.6	17.46
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	46.8	17.44
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	46.4	17.31
TraesCS4D01G188600.1	Wheat	golgi	46.4	17.24
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	46.4	17.24
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.6	17.14
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.2	16.94
Os07t0690900-01	Rice	plasma membrane	45.6	16.89
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	44.8	16.79
GSMUA_Achr4P33540_001	Banana	vacuole	44.4	16.69
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	44.0	16.64
Solyc09g075540.1.1	Tomato	plasma membrane	42.8	16.41
TraesCS2B01G107700.1	Wheat	plasma membrane	43.2	16.39
TraesCS2D01G092100.1	Wheat	plasma membrane	42.8	16.21
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	42.8	16.19
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	43.2	15.61
HORVU4Hr1G054770.1	Barley	plastid	46.8	14.81
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	23.6	12.88
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	23.2	12.69
GSMUA_Achr4P14440_001	Banana	plasma membrane	22.8	12.45
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	22.0	12.3
GSMUA_Achr4P27070_001	Banana	cytosol	19.6	11.84
GSMUA_Achr2P06240_001	Banana	mitochondrion	22.4	11.74

Protein Annotations

EnsemblPlants:GSMUA_Achr8P10390_001	EnsemblPlants:GSMUA_Achr8T10390_001	EnsemblPlantsGene:GSMUA_Achr8G10390_001	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31052	PFAM:PD140986	PFAM:PF04833	UniParc:UPI000295FCB2	UniProt:M0TP92
MapMan:35.1	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G10390_001]

Coordinates

chr8:+:7409102..7409854

Molecular Weight (calculated)

27948.4 Da

IEP (calculated)

7.235

GRAVY (calculated)

-0.318

Length

250 amino acids

Sequence
(BLAST)

001: MTNSTSFLPR DSGDITIAYD VIQSYPSSYL AQVTIENRNP LGRLDHWQLS WEWERHEFIH SMKGAYPAVI DASDCIFGRQ GQFYTDSLDF SKALSCKRKP
101: TIVDLPPWRF NDTDLGGIPH CCRNGTILSP EMDLEKVVSS FQLQVSKIPR DLNRSILFPP GQLEHLWHAQ AGLSVRPAHP RQPLGVPRPE RPLLQQPGAR
201: ELAGGLQHLP PQGVPRTYHC LYGPAPDCFG SCALRPVVVL LQGESAFIPS

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.