Factsheet for TraesCS2D01G092100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G107700.1	Wheat	plasma membrane	94.09	94.23
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	92.12	91.98
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	93.94	89.6
HORVU2Hr1G015440.1	Barley	cytosol	69.24	82.94
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	65.45	65.36
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	63.94	64.53
Os07t0690900-01	Rice	plasma membrane	65.76	64.3
TraesCS4D01G188600.1	Wheat	golgi	60.3	59.14
GSMUA_AchrUn_...	Banana	plasma membrane	51.82	51.27
GSMUA_Achr11P...	Banana	plasma membrane	51.67	50.44
PGSC0003DMT400065836	Potato	cytosol	34.7	48.83
VIT_05s0077g01470.t01	Wine grape	plasma membrane	48.03	48.69
KRH50776	Soybean	endoplasmic reticulum, vacuole	46.52	47.74
KRH02312	Soybean	endoplasmic reticulum, extracellular	46.21	47.36
Bra033528.1-P	Field mustard	plasma membrane	46.52	46.59
CDY32210	Canola	plasma membrane	46.52	46.52
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	46.36	46.29
CDY34424	Canola	plasma membrane	46.21	46.28
KRH37033	Soybean	extracellular	45.45	46.15
VIT_07s0005g01020.t01	Wine grape	plasma membrane	45.0	45.9
Solyc01g065530.2.1	Tomato	nucleus, plastid	45.0	45.83
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	45.15	45.78
AT3G16860.1	Thale cress	plasma membrane	45.15	45.64
Bra036147.1-P	Field mustard	plasma membrane	45.45	45.32
CDY49611	Canola	plasma membrane	45.45	45.32
CDY00037	Canola	plasma membrane	45.3	45.17
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.45	45.11
Solyc09g075540.1.1	Tomato	plasma membrane	44.24	44.79
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	44.39	44.19
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.39	43.93
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	44.09	43.63
GSMUA_Achr8P10390_001	Banana	cytosol	16.21	42.8
TraesCS7D01G136500.1	Wheat	mitochondrion	42.73	41.84
TraesCS6D01G364400.1	Wheat	extracellular	18.48	27.29
TraesCS2D01G182400.1	Wheat	plasma membrane	18.33	27.07
TraesCS4D01G082700.1	Wheat	extracellular	18.33	26.25
TraesCS5D01G402000.1	Wheat	extracellular	8.94	25.88
TraesCS5D01G401900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	17.73	25.6
TraesCS5D01G107900.1	Wheat	extracellular	16.97	24.94
TraesCS2D01G182500.1	Wheat	golgi	17.12	24.84
TraesCS2D01G386400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	15.91	23.76
TraesCS3D01G047900.1	Wheat	plastid	8.48	22.49
TraesCS3D01G404800.2	Wheat	plasma membrane	13.94	20.13

Protein Annotations

EnsemblPlants:TraesCS2D01G092100.1	EnsemblPlantsGene:TraesCS2D01G092100	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31052	PANTHER:PTHR31052:SF10	PFAM:PD140986	PFAM:PF04833	SEG:seg	SignalP:SignalP-noTM
MapMan:21.1.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:43897738..43899720

Molecular Weight (calculated)

70539.0 Da

IEP (calculated)

4.948

GRAVY (calculated)

0.013

Length

660 amino acids

Sequence
(BLAST)

001: MHARLALVFL LFVALAAAQP LPAPAPADVG CNGVFLTYAP EAHQRIRPFV DPAAAAAGRQ PYSFRASATV LNNGVRTLPS WALLVAFAHG EILVSLDGAV
101: LTFGDDLPYN TTAAGGGATS LSGNPQTDLL TPIATAGDLT RIQATVKLVG TLFAGPEPVV TLPSAISLAD PAYSCLPVAT APSVLSACCV LIAPDQPSAV
201: PPAAGNTYLP RVTGDLVITY DVLQAHETTY LALVTLENNA AMGRLDGWEL SWEWRRGEFV NSMRGAYPRE VDTRGCLYGP QGQYYKDLDF SKVLNCERRP
301: VVHDLPPSRR DDKSLGQIEH CCRNGTILPK TMDEAQSRSA FQMEVYKMPP DLNRTARPHA PANFRISGAS PLNQAYACGQ PALVSPTEFP DPSGLVSTTL
401: AVSTWQAVCN MTVDDSKPSK PPQCCVSFSA FYNESVIPCS TCACGCPAST PAAPTTTCST TAPALLLPPH ALLMPFEWRA KETLKWYHDE ELGAPPNPTP
501: CGDSCGVSVN WHVATDAAGG WSARVTLFNW EEGADMRDWF ATVVMDDKVY GGFEQAYSFN ATAVGDGAIF MRGREGFELL LRESNVSGVD YPVPGKQQSV
601: LSFTKKNGPG DVDVVGGDGF PTKVFFNGEE CAMPQMIPSQ GVGIRASRGV LVLLLFLLFF

Best Arabidopsis Sequence Match ( AT3G16860.1 )
(BLAST)

001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI

Arabidopsis Description

COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.