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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 92.18 91.9
AT3G16860.1 Thale cress plasma membrane 75.79 77.18
CDY32210 Canola plasma membrane 70.23 70.76
CDY34424 Canola plasma membrane 69.92 70.56
PGSC0003DMT400065836 Potato cytosol 43.61 61.83
VIT_05s0077g01470.t01 Wine grape plasma membrane 60.3 61.6
KRH50776 Soybean endoplasmic reticulum, vacuole 59.4 61.43
KRH02312 Soybean endoplasmic reticulum, extracellular 59.4 61.34
Solyc01g065530.2.1 Tomato nucleus, plastid 57.44 58.95
CDY49611 Canola plasma membrane 58.65 58.91
CDY00037 Canola plasma membrane 58.65 58.91
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 57.59 58.83
VIT_07s0005g01020.t01 Wine grape plasma membrane 55.19 56.72
KRH37033 Soybean extracellular 54.89 56.15
Solyc09g075540.1.1 Tomato plasma membrane 54.29 55.37
GSMUA_AchrUn_... Banana plasma membrane 50.23 50.08
Zm00001d028826_P001 Maize plasma membrane 49.17 49.03
GSMUA_Achr11P... Banana plasma membrane 49.62 48.82
TraesCS4B01G187300.1 Wheat golgi 48.87 48.73
EER95000 Sorghum endoplasmic reticulum, extracellular, plasma membrane 49.02 48.66
TraesCS4D01G188600.1 Wheat golgi 48.87 48.29
TraesCS4A01G117100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 48.72 48.14
Os03t0301200-01 Rice extracellular, plasma membrane, vacuole 48.57 48.14
CDY19626 Canola mitochondrion 29.77 48.06
CDY36030 Canola vacuole 46.32 47.53
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 46.62 47.4
OQU90545 Sorghum extracellular, plasma membrane, vacuole 46.77 47.05
CDX82237 Canola endoplasmic reticulum, vacuole 47.22 47.01
CDY57659 Canola cytosol 10.53 45.75
TraesCS2B01G107700.1 Wheat plasma membrane 45.26 45.68
GSMUA_Achr8P10390_001 Banana cytosol 17.14 45.6
CDY09102 Canola cytosol 17.89 45.59
TraesCS2D01G092100.1 Wheat plasma membrane 45.11 45.45
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 44.51 44.78
Os07t0690900-01 Rice plasma membrane 44.96 44.3
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 43.76 43.76
CDY29275 Canola extracellular, plasma membrane, vacuole 43.31 43.31
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 44.06 42.9
HORVU2Hr1G015440.1 Barley cytosol 35.49 42.83
CDX89278 Canola extracellular, golgi, vacuole 42.56 42.68
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 44.36 42.63
HORVU4Hr1G054770.1 Barley plastid 48.27 40.63
CDY55591 Canola plasma membrane 46.02 36.78
CDY43072 Canola plasma membrane 46.02 36.21
CDX90983 Canola extracellular 19.4 29.66
CDX85543 Canola extracellular, plasma membrane, vacuole 19.7 28.73
CDY70289 Canola extracellular 16.69 27.96
CDX69511 Canola plasma membrane 19.1 27.91
CDX93481 Canola plasma membrane 18.35 27.79
CDX85277 Canola extracellular 18.2 27.75
CDX86358 Canola extracellular 18.05 27.52
CDY60470 Canola plasma membrane 18.5 26.86
CDY43250 Canola plasma membrane 18.35 26.7
CDY26444 Canola plastid 14.59 26.5
CDY31063 Canola plasma membrane 17.29 26.5
CDY02184 Canola plasma membrane 17.89 26.04
CDY20671 Canola extracellular, plasma membrane, vacuole 17.74 25.93
CDY16831 Canola plasma membrane 17.74 25.76
CDY58691 Canola plasma membrane 17.59 25.55
CDX87193 Canola plasma membrane 17.29 25.22
CDY66895 Canola cytosol 2.11 24.56
CDY42842 Canola cytosol 4.21 22.95
CDY29033 Canola cytosol 6.17 22.53
CDY24004 Canola cytosol, nucleus, plastid 2.86 22.35
CDY02181 Canola endoplasmic reticulum, extracellular 6.92 22.33
CDY58695 Canola extracellular 6.77 21.84
CDY26445 Canola cytosol 5.26 20.71
CDX94950 Canola nucleus 17.14 20.0
CDX87194 Canola mitochondrion 5.86 18.66
CDY14723 Canola cytosol 8.42 17.61
CDX70627 Canola cytosol, nucleus, plasma membrane 19.4 15.04
Protein Annotations
MapMan:21.1.2.2GO:A0A078IRW9UniProt:A0A078IRW9EnsemblPlants:CDY52722ProteinID:CDY52722ProteinID:CDY52722.1
InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00007660001
PFAM:PD140986PFAM:PF04833PANTHER:PTHR31052PANTHER:PTHR31052:SF3SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EECC64SEG:seg::::
Description
BnaC01g44070DBnaC01g44070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRW9]
Coordinates
chrLK033122:-:38003..40451
Molecular Weight (calculated)
72609.8 Da
IEP (calculated)
7.608
GRAVY (calculated)
-0.158
Length
665 amino acids
Sequence
(BLAST)
001: MILMGLALKL FILLSLFTTI QLTSSQQRFN DSTPPPPPPP PPGPPPISPD AVLCNGVFLS YTYSTGTQIK PNDTKSQPYR FESVITVLNN GRDELKSWLV
101: FVGFAHKEIL VSASNAILED GSSLPVSVEN GTTFAGYPAA DLKSAIMTAG DVTQMEARVE LVGTQFGVAP PGVPLPKNIT LVNDGWSCPK ATQRDGNVLE
201: VCCMPDPKNE TGPIGVKRRQ KGDLTIMYDI IRPYASSYWA QVTIENHNPL GRLDNWDLSF EWMKDEFIFQ TKGAYPSVVD SSACIDGPQG KYYSGVDFSN
301: VLSCARRPHI IDLPLTKYND SNLGLKPYCC RNGTILSPSM DPTKSKSVFQ MEVYKMPPDL NISAIAPPQG WQIKGNLNPD YKCGSPVGVS LSEFPDPSGL
401: PSNRTAFASW QVVCNITQPK PPSCCVSFSS YLNDSIIPCN TCACRDCSSE RVDQTCSTNS PALLLPPQAL LIPFENRTKF ATSWAELKHR KVPSPLPCGD
501: SCGVSINWHL ATDYRRGWTA RITIFNWGGT NFADWSAAVE LKNAAPDFEK AYSFNATTVA VDGKNTTVLM EGLPGLNYLV AEVDAKNPSK DYRVPGKQQS
601: VISFTKKLNP GIKVRAGDGF PTKVFFNGQE CSLPSILPSN GHKGRVSTFL LLVLPVFALL SLIWV
Best Arabidopsis Sequence Match ( AT3G16860.1 )
(BLAST)
001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
Arabidopsis Description
COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.