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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
TargetP:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G092100.1 Wheat plasma membrane 91.98 92.12
TraesCS2B01G107700.1 Wheat plasma membrane 90.17 90.44
HORVU2Hr1G015440.1 Barley cytosol 75.34 90.38
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 91.07 86.99
OQU90545 Sorghum extracellular, plasma membrane, vacuole 65.51 65.51
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 64.15 64.83
Os07t0690900-01 Rice plasma membrane 64.75 63.41
HORVU4Hr1G054770.1 Barley plastid 61.72 51.65
GSMUA_AchrUn_... Banana plasma membrane 51.74 51.27
GSMUA_Achr11P... Banana plasma membrane 51.59 50.44
PGSC0003DMT400065836 Potato cytosol 34.8 49.04
VIT_05s0077g01470.t01 Wine grape plasma membrane 47.96 48.69
KRH50776 Soybean endoplasmic reticulum, vacuole 46.75 48.06
KRH02312 Soybean endoplasmic reticulum, extracellular 46.29 47.52
Bra033528.1-P Field mustard plasma membrane 46.44 46.59
CDY32210 Canola plasma membrane 46.44 46.52
AT4G16120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 46.29 46.29
CDY34424 Canola plasma membrane 46.14 46.28
KRH37033 Soybean extracellular 45.39 46.15
Solyc01g065530.2.1 Tomato nucleus, plastid 45.23 46.14
VIT_07s0005g01020.t01 Wine grape plasma membrane 45.08 46.06
AT3G16860.1 Thale cress plasma membrane 45.39 45.94
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 45.08 45.78
Solyc09g075540.1.1 Tomato plasma membrane 44.63 45.25
Bra036147.1-P Field mustard plasma membrane 44.63 44.56
CDY49611 Canola plasma membrane 44.63 44.56
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 44.78 44.51
CDY00037 Canola plasma membrane 44.48 44.41
AT5G49270.1 Thale cress extracellular, plasma membrane, vacuole 44.18 44.04
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 44.02 43.63
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.72 43.33
HORVU7Hr1G028350.1 Barley golgi, mitochondrion, plasma membrane 43.57 42.86
GSMUA_Achr8P10390_001 Banana cytosol 16.19 42.8
HORVU2Hr1G033060.13 Barley mitochondrion 17.7 26.17
HORVU4Hr1G014530.1 Barley extracellular 17.85 25.49
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 10.59 25.09
HORVU5Hr1G095910.12 Barley extracellular, vacuole 16.64 23.91
HORVU0Hr1G004650.3 Barley mitochondrion 14.98 23.86
HORVU3Hr1G009960.1 Barley plastid 7.72 23.39
HORVU3Hr1G007580.2 Barley extracellular 13.16 23.2
HORVU2Hr1G033070.14 Barley mitochondrion 16.04 22.55
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 16.04 22.46
HORVU2Hr1G033080.1 Barley extracellular 5.6 20.11
HORVU2Hr1G092510.1 Barley mitochondrion 7.41 15.31
Protein Annotations
EnsemblPlants:HORVU0Hr1G030030.1EnsemblPlantsGene:HORVU0Hr1G030030GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
PANTHER:PTHR31052PANTHER:PTHR31052:SF10PFAM:PD140986PFAM:PF04833SEG:segSignalP:SignalP-noTM
UniParc:UPI000B478B08UniProt:A0A287EA19MapMan:21.1.2.2:::
Description
No Description!
Coordinates
chrchrUn:+:167238922..167240905
Molecular Weight (calculated)
70635.0 Da
IEP (calculated)
4.818
GRAVY (calculated)
0.033
Length
661 amino acids
Sequence
(BLAST)
001: TIMETVHALV FFLFVALAAA QPLPAPAPAP ADVGCNGVFL TYAPEAHERI RPFVDPAAAA AGRQPYSFRA SATVLNNGVR TLPSWALLVA FAHGEILVSV
101: DGAVLTFGDD LPYNTTATGG GATSLSGNPQ TDLLTPIATA GDLTRIQATV KLVGTLFAGP EPVVTLPSAI SLADPAYACL PVATAPTVLS ACCVLNAPDQ
201: PAADPPAGNA YLPRVTGDLV ITYDVLQAHE TTYLALVTLE NNAPMGRLDG WELSWEWRRG EFVNSMRGAY PRAVDTRGCL YGPQGQYYKD LDFSKVLNCE
301: RWPVVHDLPP SRRDDTSLGQ IEHCCRNGTI LPKTMDEAQS KSAFQMEVYK MPPDLNRTAR PHAPANFRVS GASPLNQAYV CGQPALVSPT EFPDPSGLAS
401: TTLAVATWQA VCNMPVDDSK AAKPPHCCVS FSAFYNESVI PCSTCACGCP TPAPTTCSTT APALLLPPHA LLMPFEWRAK ETLKWLHDEE LGAPPNPMPC
501: GDNCGVSVNW HVATDAAGGW SARVTLFNWE GADMRDWFAT VVMDDKVYGG FEQAYSFNAT AVGDGAIFMR GREGFDFLLR ENNVSGVDYP VPGKQQSVLS
601: FTKKTAAGDV DVVGGDGFPT KIFFNGEECA MPQRIPSQGV GIRASRGGVL VLLLLSFFFF L
Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.