Factsheet for Bra036147.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49611	Canola	plasma membrane	98.94	98.94
CDY00037	Canola	plasma membrane	98.94	98.94
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	86.25	86.12
Bra033528.1-P	Field mustard	plasma membrane	64.35	64.64
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	58.31	57.87
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	28.7	50.0
GSMUA_AchrUn_...	Banana	plasma membrane	50.15	49.78
GSMUA_Achr11P...	Banana	plasma membrane	50.45	49.41
TraesCS4B01G187300.1	Wheat	golgi	49.09	48.73
Zm00001d028826_P001	Maize	plasma membrane	48.94	48.58
TraesCS4D01G188600.1	Wheat	golgi	49.24	48.44
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.24	48.44
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	48.34	47.76
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	48.34	47.69
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	47.43	47.01
GSMUA_Achr8P10390_001	Banana	cytosol	17.52	46.4
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	46.22	46.29
Bra023941.1-P	Field mustard	plasma membrane	46.98	46.28
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	45.32	45.87
TraesCS2B01G107700.1	Wheat	plasma membrane	45.47	45.68
TraesCS2D01G092100.1	Wheat	plasma membrane	45.32	45.45
Os07t0690900-01	Rice	plasma membrane	45.92	45.04
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	44.26	44.87
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	44.56	44.63
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	44.26	44.19
Bra020151.1-P	Field mustard	cytosol	16.92	43.24
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	45.02	43.06
HORVU2Hr1G015440.1	Barley	cytosol	35.8	43.01
HORVU4Hr1G054770.1	Barley	plastid	48.64	40.76
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	18.73	28.57
Bra030800.1-P	Field mustard	cytosol	17.07	27.1
Bra025406.1-P	Field mustard	extracellular	17.82	27.06
Bra012996.1-P	Field mustard	plasma membrane	18.43	26.7
Bra019992.1-P	Field mustard	cytosol	15.86	26.45
Bra035951.1-P	Field mustard	plasma membrane	17.98	25.98
Bra040587.1-P	Field mustard	extracellular	17.22	25.97
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	17.82	25.93
Bra008684.1-P	Field mustard	extracellular	14.65	25.06
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	7.55	24.27
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	4.38	23.58
Bra035948.1-P	Field mustard	cytosol	2.87	19.59

Protein Annotations

MapMan:21.1.2.2	EnsemblPlantsGene:Bra036147	EnsemblPlants:Bra036147.1	EnsemblPlants:Bra036147.1-P	InterPro:COBRA_pln	GO:GO:0005575
GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009932	GO:GO:0009987	GO:GO:0010053
GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154
GO:GO:0031225	GO:GO:0040007	GO:GO:0048765	UniProt:M4F4Z3	PFAM:PD140986	PFAM:PF04833
PANTHER:PTHR31052	PANTHER:PTHR31052:SF3	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002541ECD	SEG:seg

Description

AT5G49270 (E=0.0) SHV2, DER9, MRH4, COBL9 | SHV2 (SHAVEN 2)

Coordinates

chrA09:-:2476319..2478773

Molecular Weight (calculated)

73099.2 Da

IEP (calculated)

5.162

GRAVY (calculated)

-0.061

Length

662 amino acids

Sequence
(BLAST)

001: MGFLLPILLG VFLLFTATPP SLSQFPPEID PPAPAPISPS ELCNGIFLSY TFILGRQIPP NDTTDQPYRF ESVLTVLNNG REELKEWRVF VGFQHHEILT
101: SASDAIIVNG TDLPAPVGNG TIFAGYPVSD LKTAIQTAGD LKQMTATIEL VGTQFMVAPP AIPLPSNISL VNDGWSCPEP TATPLSKRQI TTCCIRDPTF
201: EVNTTTITDK FLPRQPGDLT IMYDVIRAYD QNYLAEVTME NHNPLGRLDH WELSFDWMRE EFIQKMQGAY PTVVDATKCI FGPQSQIYTG LDFADVLTCE
301: RRPIIVDLPP TKAEDPVLGK IPSCCRNGTI LPRTMDPSKS ASIFTMQVAK MPPDFNRSAL SPPQNWRIKG TLNPDYSCGP PVRVSPTLYP DPSGMPTNKT
401: SFASWQIVCN ITHAKTETPK CCVSFSAFFN DSIIPCNTCA CGCVSETRRT CSAETPSLLI PPDALLVPFE NRTSLTVAWN ALKHKTIPNP MPCGDNCGVS
501: INWHIATDYR GGWTARITIF NWGEIDFPDW FLAVQMKKPA IRGFEKAYSF NASLLSIEGG VNNTIFMEGL PGLEYLVAER DELDPKKKLR VPGKQQSVIQ
601: FSKKLTPGIN VPERDGFPAK VIFNGEECLL PDVLPLPSGG RRNGFDTMVL LCMMIFVVAL VI

Best Arabidopsis Sequence Match ( AT5G49270.1 )
(BLAST)

001: MGVLLPIFFG VLLLFTVTPP SMSQLPPTIM VPAPAPAPIS PSDLCNGIFL SYDFILGRKI PPNDTADQPY RFESVLTVLN NGREELKEWR VFVGFQHNEI
101: LISATDALIV NGTELPALVG NGTIFGGYPV SDLKTAIQTA GDLKQMTAEI ELVGTQFMVA PPAVPLPSNI SLVNEGWLCP VPTLQSKREL TTCCIRDASI
201: IVNTTITTKF LPRQPGDLTI MYDVIRAYDQ NYLTEVTMEN HNPLGRLDHW ELSFDWMRDE FIQKMQGAYP TVVDATKCIF GPQSLIYTGL DFADVLTCER
301: RPIIIDLPPT KKDDSTLGNI PSCCRNGTIL PRIMDPSKSV SVFTMQVAKM PPDFNRSALF PPQNWRIKGT LNPDYSCGPP VRVTPTFYPD PSGMPTNKSS
401: FASWQIVCNI TQAKTEIPKC CVSFSAFFND SIIPCNTCAC GCVSETRRTC SAETPSLLIP PDALLLPFEN RTALTLAWNA LKHKTLPNPM PCGDNCGVSI
501: NWHMASDYRG GWTVRITIFN WGEIDFPNWF LAVQMKKPAL LGFEKAYSFN ASLLSVDGGV NNTIFMEGLP GLDYLVAEAD EKDPKKKNIR IPGKQQSVIQ
601: FSKKLTPGIN VAERDGFPAK VIFNGEECLL PDLLPMASGG RRNGAITVLS FITFYVAAFM VLL

Arabidopsis Description

COBL9COBRA-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ13]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.