Factsheet for Bra008684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 7
vacuole 6
golgi 5
extracellular 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	93.54	83.41
CDX69511	Canola	plasma membrane	97.67	83.08
AT5G15630.1	Thale cress	extracellular, plasma membrane, vacuole	92.51	83.06
KRH18350	Soybean	cytosol	36.18	78.65
CDY26444	Canola	plastid	69.77	73.77
KRH01361	Soybean	extracellular, plasma membrane, vacuole	79.07	71.0
KRH45086	Soybean	plasma membrane	78.81	70.77
VIT_14s0083g01150.t01	Wine grape	plasma membrane	78.04	70.07
PGSC0003DMT400003723	Potato	extracellular	77.78	69.35
KRG93686	Soybean	extracellular, plasma membrane, vacuole	77.0	69.14
PGSC0003DMT400002674	Potato	plasma membrane	76.23	67.97
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	72.87	63.09
PGSC0003DMT400082702	Potato	extracellular	40.05	62.5
GSMUA_Achr4P14440_001	Banana	plasma membrane	73.64	62.23
EER94687	Sorghum	extracellular	71.32	61.88
Zm00001d047276_P001	Maize	plasma membrane	71.06	61.11
TraesCS5D01G107900.1	Wheat	extracellular	70.54	60.8
TraesCS5A01G095200.1	Wheat	extracellular	70.03	60.36
EER99679	Sorghum	plasma membrane	69.51	60.31
TraesCS5B01G101400.1	Wheat	extracellular	70.03	60.22
TraesCS2D01G182400.1	Wheat	plasma membrane	68.99	59.73
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	68.73	59.51
TraesCS2A01G175000.1	Wheat	plasma membrane	68.99	59.47
TraesCS2B01G201400.1	Wheat	plasma membrane	68.73	59.38
Os03t0416200-01	Rice	extracellular, golgi, plasma membrane	70.8	58.55
HORVU3Hr1G007580.2	Barley	extracellular	55.81	57.6
Os07t0604400-00	Rice	extracellular	66.15	56.76
Bra025406.1-P	Field mustard	extracellular	62.79	55.73
HORVU2Hr1G033060.13	Barley	mitochondrion	64.08	55.48
Bra012996.1-P	Field mustard	plasma membrane	64.08	54.27
Bra035948.1-P	Field mustard	cytosol	13.44	53.61
HORVU2Hr1G033080.1	Barley	extracellular	25.32	53.26
Bra035951.1-P	Field mustard	plasma membrane	62.79	53.06
Bra040587.1-P	Field mustard	extracellular	59.95	52.85
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	16.8	52.85
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	62.02	52.75
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	27.13	50.97
HORVU0Hr1G004650.3	Barley	mitochondrion	54.52	50.84
TraesCSU01G047200.1	Wheat	plastid	29.46	49.14
HORVU3Hr1G009960.1	Barley	plastid	27.65	49.08
TraesCS3D01G047900.1	Wheat	plastid	30.49	47.39
Bra030800.1-P	Field mustard	cytosol	47.29	43.88
Bra019992.1-P	Field mustard	cytosol	42.64	41.56
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	23.26	23.68
Bra023941.1-P	Field mustard	plasma membrane	27.65	15.92
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	27.13	15.72
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	25.32	15.01
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.84	14.99
Bra036147.1-P	Field mustard	plasma membrane	25.06	14.65
Bra033528.1-P	Field mustard	plasma membrane	24.81	14.57
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	24.81	14.48
Bra020151.1-P	Field mustard	cytosol	9.56	14.29

Protein Annotations

MapMan:21.1.2.2	EnsemblPlantsGene:Bra008684	EnsemblPlants:Bra008684.1	EnsemblPlants:Bra008684.1-P	InterPro:COBRA_pln	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	UniProt:M4CWT7	PFAM:PD140986	PFAM:PF04833
PIRSF:PIRSF038122	PANTHER:PTHR31673	PANTHER:PTHR31673:SF2	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002544DFD
SEG:seg	:	:	:	:	:

Description

AT5G15630 (E=2e-106) COBL4, IRX6 | IRX6

Coordinates

chrA10:-:13379678..13381605

Molecular Weight (calculated)

43688.7 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.156

Length

387 amino acids

Sequence
(BLAST)

001: MRLFFCFCFC FFSMLIFTTS AYDPLDPNGN ITLKWDIMSW TADGYVATVT MNNFQIYRHI QNPGWTLGWA WAKKEVIWSM VGAQTTEQGD CSKFKGNVPH
101: CCKKTPTVVD LLPGVPYNQQ ISNCCKGGVV GAWGQDPSSA VSQFQVSVGL AGTTNKTVKL PKNFTLLGPG PGYTCGPAKI VPSTVFFTTD KRRKTQALSK
201: ADSKILTKKG LNTPRKDNAP LLQCTHHMCP VRVHWHVKVN YKDYWRVKIA ITNFNYRMNH TLWTLAVQHP NLNNVTQVFS FDYKSVAPYG SINDTGMFYG
301: TKFYNDLLME AGPSGNVQSE VLLQKDQKTF TFKQGWAFPR KVYFNGDECM LPPPDSYPFL PNSARGNLAS FWILSLTILI LMFISIW

Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)

001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W

Arabidopsis Description

COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.