Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012993.1-P | Field mustard | endoplasmic reticulum, extracellular | 100.0 | 100.0 |
| CDY58695 | Canola | extracellular | 94.17 | 94.17 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 81.07 | 81.86 |
| CDY66895 | Canola | cytosol | 19.42 | 70.18 |
| PGSC0003DMT400082702 | Potato | extracellular | 55.34 | 45.97 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 18.93 | 45.88 |
| CDX87194 | Canola | mitochondrion | 42.72 | 42.11 |
| CDY29033 | Canola | cytosol | 36.41 | 41.21 |
| CDY70289 | Canola | extracellular | 56.8 | 29.47 |
| CDY02184 | Canola | plasma membrane | 62.62 | 28.23 |
| CDY58691 | Canola | plasma membrane | 62.62 | 28.17 |
| CDX87193 | Canola | plasma membrane | 62.14 | 28.07 |
| CDY16831 | Canola | plasma membrane | 62.14 | 27.95 |
| CDX86358 | Canola | extracellular | 58.25 | 27.52 |
| PGSC0003DMT400003723 | Potato | extracellular | 56.8 | 26.96 |
| CDX85277 | Canola | extracellular | 56.8 | 26.83 |
| VIT_14s0083g01150.t01 | Wine grape | plasma membrane | 55.34 | 26.45 |
| PGSC0003DMT400002674 | Potato | plasma membrane | 55.34 | 26.27 |
| CDX90983 | Canola | extracellular | 53.88 | 25.52 |
| CDY26444 | Canola | plastid | 44.17 | 24.86 |
| CDY14723 | Canola | cytosol | 38.35 | 24.84 |
| CDY60470 | Canola | plasma membrane | 53.88 | 24.24 |
| CDX69511 | Canola | plasma membrane | 53.4 | 24.18 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 53.4 | 24.12 |
| CDY43250 | Canola | plasma membrane | 53.4 | 24.07 |
| CDX93481 | Canola | plasma membrane | 39.32 | 18.45 |
| CDY31063 | Canola | plasma membrane | 36.41 | 17.28 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 35.92 | 16.26 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 54.37 | 13.05 |
| CDX94950 | Canola | nucleus | 33.01 | 11.93 |
| CDY19626 | Canola | mitochondrion | 19.9 | 9.95 |
| CDY09102 | Canola | cytosol | 11.65 | 9.2 |
| CDY34424 | Canola | plasma membrane | 26.21 | 8.19 |
| CDY32210 | Canola | plasma membrane | 26.21 | 8.18 |
| CDY36030 | Canola | vacuole | 25.73 | 8.18 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 25.73 | 7.93 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 24.27 | 7.54 |
| CDY49611 | Canola | plasma membrane | 23.79 | 7.4 |
| CDY00037 | Canola | plasma membrane | 23.79 | 7.4 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 23.79 | 7.37 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 22.82 | 7.07 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.33 | 6.92 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.33 | 6.9 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.82 | 6.88 |
| CDY43072 | Canola | plasma membrane | 25.73 | 6.27 |
| CDY55591 | Canola | plasma membrane | 25.24 | 6.25 |
| CDY26445 | Canola | cytosol | 2.91 | 3.55 |
| CDY57659 | Canola | cytosol | 0.0 | 0.0 |
| CDY42842 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY02181 | EnsemblPlantsGene:GSBRNA2T00113589001 | GO:A0A078ELV2 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| InterPro:COBRA_pln | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | PFAM:PD140986 | PFAM:PF04833 | ProteinID:CDY02181 |
| ProteinID:CDY02181.1 | SignalP:SignalP-noTM | UniParc:UPI00025404FF | MapMan:21.1.2.2 | : | : |
Description
BnaA03g39860D
Coordinates
chrLK031932:+:551709..552643
Molecular Weight (calculated)
23061.2 Da
IEP (calculated)
10.414
GRAVY (calculated)
-0.168
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLFSAMIV LLLVSSSCFT SSEALTSNKG NITIKWDLMT WTPDGYVAVV SAYNYQKQRS IPSPGWKMSW RWTRKEVIWS MVGARTTKQG DCSMFKGNIP
101: HSCINKPTVI DLPPKTPYNQ QIANCCKGGV LKPGLESAFQ ISVGQAGTTV KTVRMPVNFM FTAPKQQYIC GPTKNVRPTT FITADKRRMT RALMTWNITC
201: VFHKAT
101: HSCINKPTVI DLPPKTPYNQ QIANCCKGGV LKPGLESAFQ ISVGQAGTTV KTVRMPVNFM FTAPKQQYIC GPTKNVRPTT FITADKRRMT RALMTWNITC
201: VFHKAT
001: MESLFSTMIV LLLVSFSCLI STEALTSNYG NITVKWDLLN WTPDGYVAVV TAYNYQKQRS IPGWKMSWRG TKKEVIWNML GAKTTGQGGC SMFKGNIPQS
101: CVRKPTVVDL LPGTPFNQQI ANCCKSGVLK PGSESAFQLS VGSAGNSVKT ARMPANFMFT APKQQYICGP SKNVRPTRFT TADKRRITAA LMTWNITCVF
201: HKAT
101: CVRKPTVVDL LPGTPFNQQI ANCCKSGVLK PGSESAFQLS VGSAGNSVKT ARMPANFMFT APKQQYICGP SKNVRPTRFT TADKRRITAA LMTWNITCVF
201: HKAT
Arabidopsis Description
COBL5COBRA-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.