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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025406.1-P Field mustard extracellular 97.71 97.71
CDX86358 Canola extracellular 97.71 97.71
CDY70289 Canola extracellular 77.06 84.63
CDY66895 Canola cytosol 10.09 77.19
CDY24004 Canola cytosol, nucleus, plastid 14.91 76.47
KRH72178 Soybean mitochondrion 62.16 73.44
KRH01360 Soybean extracellular, golgi, plasma membrane 75.46 73.44
KRH45084 Soybean extracellular, golgi, plasma membrane 74.77 72.77
CDY43250 Canola plasma membrane 75.46 71.99
CDY60470 Canola plasma membrane 75.46 71.83
Zm00001d031479_P001 Maize cytosol, mitochondrion 26.38 70.12
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 73.62 70.09
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 72.94 69.58
KRG93684 Soybean extracellular, vacuole 72.25 69.38
CDY02184 Canola plasma membrane 72.02 68.71
Os07t0604300-01 Rice extracellular 70.18 68.61
CDY58691 Canola plasma membrane 72.02 68.56
CDX87193 Canola plasma membrane 71.56 68.42
Zm00001d013256_P001 Maize extracellular 70.41 68.37
KRH18352 Soybean plasma membrane 71.79 68.34
CDY16831 Canola plasma membrane 71.79 68.34
EER97506 Sorghum extracellular, plasma membrane 71.56 68.12
CDY42842 Canola cytosol 19.04 68.03
EER90860 Sorghum extracellular, golgi, plasma membrane 69.95 67.93
TraesCS6A01G379800.1 Wheat extracellular 69.5 67.79
CDY29033 Canola cytosol 28.21 67.58
TraesCS6B01G418400.1 Wheat extracellular 69.27 67.56
TraesCS6D01G364400.1 Wheat extracellular 68.81 67.11
Os05t0386800-01 Rice extracellular 70.18 66.96
Os03t0754500-00 Rice extracellular 32.8 66.82
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 68.58 66.15
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 69.04 65.86
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 68.81 65.65
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 68.81 65.65
GSMUA_Achr2P06240_001 Banana mitochondrion 71.79 65.62
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 68.81 65.22
OQU92393 Sorghum extracellular 68.81 65.08
EER90859 Sorghum extracellular 63.3 64.94
HORVU5Hr1G095910.12 Barley extracellular, vacuole 67.89 64.35
CDX90983 Canola extracellular 63.76 63.91
Os03t0416300-01 Rice extracellular 66.74 63.54
TraesCS4A01G231200.1 Wheat extracellular 65.37 61.96
TraesCS4D01G082700.1 Wheat extracellular 65.37 61.82
TraesCS3A01G409900.1 Wheat plastid 39.22 61.73
TraesCS4B01G084800.1 Wheat extracellular 64.22 61.54
TraesCS2A01G175100.1 Wheat extracellular 63.76 61.37
HORVU4Hr1G014530.1 Barley extracellular 64.91 61.12
TraesCS2D01G182500.1 Wheat golgi 63.53 60.88
CDX85543 Canola extracellular, plasma membrane, vacuole 63.3 60.53
CDX69511 Canola plasma membrane 62.39 59.78
HORVU2Hr1G033070.14 Barley mitochondrion 63.53 58.94
TraesCS2B01G201500.1 Wheat plasma membrane 61.93 58.82
CDY26444 Canola plastid 49.31 58.74
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 61.93 57.2
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 54.82 57.18
Os10t0497700-01 Rice extracellular 55.73 57.18
CDY02181 Canola endoplasmic reticulum, extracellular 26.83 56.8
TraesCS5D01G402000.1 Wheat extracellular 29.59 56.58
TraesCS5B01G397000.2 Wheat extracellular 29.36 56.39
CDY58695 Canola extracellular 26.61 56.31
TraesCS3D01G404800.2 Wheat plasma membrane 57.8 55.14
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 35.09 54.84
CDY31063 Canola plasma membrane 50.69 50.92
CDX93481 Canola plasma membrane 50.69 50.34
CDY20671 Canola extracellular, plasma membrane, vacuole 50.23 48.13
CDY14723 Canola cytosol 32.34 44.34
CDY26445 Canola cytosol 16.97 43.79
CDX94950 Canola nucleus 47.02 35.96
CDX70627 Canola cytosol, nucleus, plasma membrane 64.68 32.87
CDX87194 Canola mitochondrion 12.84 26.79
CDY09102 Canola cytosol 13.53 22.61
CDY57659 Canola cytosol 7.34 20.91
CDY19626 Canola mitochondrion 18.12 19.17
CDY34424 Canola plasma membrane 27.75 18.36
CDY32210 Canola plasma membrane 27.75 18.33
CDX89278 Canola extracellular, golgi, vacuole 27.75 18.25
CDY29275 Canola extracellular, plasma membrane, vacuole 27.75 18.2
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 27.75 18.2
CDY00037 Canola plasma membrane 27.52 18.13
CDY49611 Canola plasma membrane 27.52 18.13
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 27.52 17.99
CDY36030 Canola vacuole 26.61 17.9
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 27.29 17.89
CDX82237 Canola endoplasmic reticulum, vacuole 26.83 17.52
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 27.29 17.42
CDY55591 Canola plasma membrane 26.83 14.06
CDY43072 Canola plasma membrane 26.83 13.85
Protein Annotations
MapMan:21.1.2.2GO:A0A078D848EnsemblPlants:CDX85277ProteinID:CDX85277ProteinID:CDX85277.1InterPro:COBRA_pln
ncoils:CoilGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00142925001PFAM:PD140986
PFAM:PF04833PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE3648:::::
Description
BnaC07g25880D
Coordinates
chrLK031841:+:751133..753723
Molecular Weight (calculated)
48985.7 Da
IEP (calculated)
8.750
GRAVY (calculated)
-0.108
Length
436 amino acids
Sequence
(BLAST)
001: MGIRFSTISL LFLCLFSWTS FPTTEAYDAL DPTGNITIKW DIISWTADGY VAVVSIFNFQ QYRHIQAPGW QLGWSWYKKE VIWSMVGAQA TEQGDCSKFK
101: GNIPHCCKKT PTVVDLLPGT PYNQQISNCC RGGVISSWAQ DPATAVSSFQ ISVGQSGTTN TTVRAPRNVT LKAPGPGYTC GPAKVVPPTK FISNDKRRKT
201: QAMLTWNMTC TYSQFLAQKT PTCCVSLSAF YNKTIVPCPT CSCGCQNGTC VDPKIASVVP ALSGKNNLQQ LLQCTQHMCP IRVHWHVKTN YKEYWRVKVT
301: ITNFNYNMNY SQWNLVVQHP NFDNITQLFS FNYKPLSPYS GINDTAMLWG IKFYNDFLSQ AGPIGNVQSE LLFQKDPSTF TFEKGWAFPR RIYFNGDNCV
401: MPPPDSYPWL PNAASNFATS TFIVLLITFF SVLILM
Best Arabidopsis Sequence Match ( AT3G29810.1 )
(BLAST)
001: MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
Arabidopsis Description
COBL3COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.