Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013256_P001 | Maize | extracellular | 97.33 | 97.33 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 95.77 | 95.13 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 32.96 | 90.24 |
| EER90859 | Sorghum | extracellular | 80.18 | 84.71 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 84.41 | 82.93 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 84.19 | 82.71 |
| TraesCS5A01G392000.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 83.96 | 82.49 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 81.29 | 81.66 |
| TraesCS6A01G379800.1 | Wheat | extracellular | 80.62 | 80.98 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 79.73 | 80.09 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 77.73 | 75.87 |
| VIT_14s0083g01160.t01 | Wine grape | vacuole | 73.05 | 75.23 |
| VIT_17s0000g05070.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 75.5 | 74.34 |
| GSMUA_Achr4P01440_001 | Banana | extracellular, plasma membrane | 75.5 | 74.18 |
| Solyc02g065770.2.1 | Tomato | extracellular | 73.05 | 73.87 |
| GSMUA_Achr1P24500_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 75.06 | 73.58 |
| PGSC0003DMT400003470 | Potato | extracellular | 72.83 | 73.15 |
| PGSC0003DMT400068328 | Potato | extracellular | 72.16 | 72.97 |
| KRH72178 | Soybean | mitochondrion | 59.91 | 72.9 |
| Solyc02g089120.2.1 | Tomato | extracellular | 72.38 | 72.71 |
| KRH63181 | Soybean | endoplasmic reticulum | 73.72 | 72.59 |
| KRH54735 | Soybean | endoplasmic reticulum | 73.05 | 71.93 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 71.71 | 71.88 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 70.82 | 70.98 |
| KRH03165 | Soybean | extracellular | 71.49 | 70.7 |
| CDX86358 | Canola | extracellular | 68.37 | 70.41 |
| Bra025406.1-P | Field mustard | extracellular | 68.37 | 70.41 |
| KRG93684 | Soybean | extracellular, vacuole | 70.82 | 70.04 |
| CDY70289 | Canola | extracellular | 61.92 | 70.03 |
| CDX85277 | Canola | extracellular | 67.93 | 69.95 |
| GSMUA_Achr2P06240_001 | Banana | mitochondrion | 73.94 | 69.6 |
| EER97506 | Sorghum | extracellular, plasma membrane | 70.82 | 69.43 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 69.49 | 68.42 |
| CDX87193 | Canola | plasma membrane | 69.27 | 68.2 |
| AT3G29810.1 | Thale cress | extracellular | 66.82 | 68.03 |
| CDY16831 | Canola | plasma membrane | 69.27 | 67.9 |
| Bra040587.1-P | Field mustard | extracellular | 66.37 | 67.88 |
| KRH18352 | Soybean | plasma membrane | 69.04 | 67.69 |
| Bra035951.1-P | Field mustard | plasma membrane | 68.6 | 67.25 |
| CDY58691 | Canola | plasma membrane | 68.37 | 67.03 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 33.85 | 66.96 |
| CDY02184 | Canola | plasma membrane | 68.15 | 66.96 |
| Bra012996.1-P | Field mustard | plasma membrane | 67.93 | 66.74 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 33.85 | 66.67 |
| OQU92393 | Sorghum | extracellular | 67.71 | 65.94 |
| AT3G02210.1 | Thale cress | extracellular | 66.15 | 65.71 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 40.76 | 65.59 |
| Bra039163.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 65.92 | 65.05 |
| CDY60470 | Canola | plasma membrane | 66.15 | 64.85 |
| CDY43250 | Canola | plasma membrane | 65.7 | 64.55 |
| EER94687 | Sorghum | extracellular | 63.7 | 64.13 |
| EER99679 | Sorghum | plasma membrane | 63.03 | 63.45 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 11.8 | 62.35 |
| CDY42842 | Canola | cytosol | 16.93 | 62.3 |
| Bra029346.1-P | Field mustard | cytosol, plasma membrane, plastid | 16.48 | 60.16 |
| KRH56778 | Soybean | extracellular | 27.84 | 59.81 |
| CDY29033 | Canola | cytosol | 23.16 | 57.14 |
| KXG26803 | Sorghum | extracellular, plasma membrane | 46.99 | 47.2 |
| CDY14723 | Canola | cytosol | 28.06 | 39.62 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 28.95 | 19.4 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 28.06 | 19.06 |
| KXG36369 | Sorghum | mitochondrion | 28.51 | 19.02 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:8085923 | ProteinID:AAO17706.1 | InterPro:COBRA_pln | EnsemblPlants:EER90860 | ProteinID:EER90860 |
| ProteinID:EER90860.1 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | PFAM:PD140986 | PFAM:PF04833 |
| PIRSF:PIRSF038122 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | UniProt:Q84KI4 | EnsemblPlantsGene:SORBI_3001G086200 | unigene:Sbi.11005 |
| SignalP:SignalP-noTM | UniParc:UPI0000190A0D | RefSeq:XP_002463862.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:6667078..6670492
Molecular Weight (calculated)
49781.6 Da
IEP (calculated)
8.625
GRAVY (calculated)
-0.160
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGGRSVAC CAAVLLAAAL LLSAPTTTEA YDSLDPTGNI TIKWDIMQWT PDGYVAVVTM YNFQQFRHIG APGWQLGWTW AKKEVIWSMV GAQTTEQGDC
101: SKFKGNTPHC CKKDPTIVDL LPGTPYNMQI ANCCKAGVIN TFNQDPANAA SSFQISVGLA GTTNKTVKVP KNFTLKTPGP GYTCGRAIVG RPTKFWSADG
201: RRATQALMTW NVTCTYSQFL AQKTPSCCVS LSSFYNDTIV NCPTCSCGCQ NPSGSNCVNE DSPNLQAAID GPGKWTGQPL VQCTSHMCPI RIHWHVKLNY
301: KEYWRVKITI TNFNFRMNYT QWNLVAQHPN FDNITQLFSF NYKPLTPYGG GINDTAMFWG VKFYNDLLMQ AGKLGNVQSE LLLRKDSRTF TFDKGWAFPR
401: RVYFNGDNCV MPSPENYPWL PNASPLTRQP LTLPLLVFWV ALAALLAYA
101: SKFKGNTPHC CKKDPTIVDL LPGTPYNMQI ANCCKAGVIN TFNQDPANAA SSFQISVGLA GTTNKTVKVP KNFTLKTPGP GYTCGRAIVG RPTKFWSADG
201: RRATQALMTW NVTCTYSQFL AQKTPSCCVS LSSFYNDTIV NCPTCSCGCQ NPSGSNCVNE DSPNLQAAID GPGKWTGQPL VQCTSHMCPI RIHWHVKLNY
301: KEYWRVKITI TNFNFRMNYT QWNLVAQHPN FDNITQLFSF NYKPLTPYGG GINDTAMFWG VKFYNDLLMQ AGKLGNVQSE LLLRKDSRTF TFDKGWAFPR
401: RVYFNGDNCV MPSPENYPWL PNASPLTRQP LTLPLLVFWV ALAALLAYA
001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
Arabidopsis Description
COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.