Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43250 | Canola | plasma membrane | 90.27 | 89.28 |
| Bra039163.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 89.82 | 89.23 |
| CDY60470 | Canola | plasma membrane | 89.82 | 88.65 |
| KRH72178 | Soybean | mitochondrion | 61.73 | 75.61 |
| AT3G29810.1 | Thale cress | extracellular | 71.9 | 73.7 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 71.9 | 72.54 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 71.46 | 72.1 |
| KRG93684 | Soybean | extracellular, vacuole | 71.46 | 71.15 |
| GSMUA_Achr4P01440_001 | Banana | extracellular, plasma membrane | 70.8 | 70.02 |
| GSMUA_Achr1P24500_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 70.58 | 69.65 |
| KRH18352 | Soybean | plasma membrane | 70.35 | 69.43 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 69.69 | 69.08 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 24.56 | 67.68 |
| Os07t0604300-01 | Rice | extracellular | 66.37 | 67.26 |
| EER97506 | Sorghum | extracellular, plasma membrane | 68.14 | 67.25 |
| GSMUA_Achr2P06240_001 | Banana | mitochondrion | 69.91 | 66.25 |
| Zm00001d013256_P001 | Maize | extracellular | 65.71 | 66.15 |
| EER90860 | Sorghum | extracellular, golgi, plasma membrane | 65.71 | 66.15 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 67.04 | 65.87 |
| Os05t0386800-01 | Rice | extracellular | 66.37 | 65.65 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 62.17 | 65.2 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 64.38 | 65.1 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 64.82 | 64.82 |
| EER90859 | Sorghum | extracellular | 60.84 | 64.71 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 63.72 | 64.43 |
| TraesCS6A01G379800.1 | Wheat | extracellular | 63.5 | 64.21 |
| Os03t0416300-01 | Rice | extracellular | 65.04 | 64.19 |
| OQU92393 | Sorghum | extracellular | 65.27 | 63.99 |
| TraesCS5A01G392000.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 64.38 | 63.68 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 64.16 | 63.46 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 64.16 | 63.46 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 63.94 | 62.83 |
| Os03t0754500-00 | Rice | extracellular | 29.42 | 62.15 |
| TraesCS2A01G175100.1 | Wheat | extracellular | 60.84 | 60.71 |
| TraesCS4A01G231200.1 | Wheat | extracellular | 61.73 | 60.65 |
| TraesCS3A01G409900.1 | Wheat | plastid | 36.73 | 59.93 |
| TraesCS2D01G182500.1 | Wheat | golgi | 60.18 | 59.78 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 60.84 | 59.65 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 61.06 | 59.61 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 59.96 | 59.56 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 59.29 | 58.39 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 59.96 | 57.66 |
| Os10t0497700-01 | Rice | extracellular | 53.76 | 57.18 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 51.99 | 56.22 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 57.3 | 54.87 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 24.34 | 53.92 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 53.98 | 53.39 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 26.11 | 51.98 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 26.11 | 51.75 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 31.42 | 50.9 |
| AT1G09790.1 | Thale cress | plasma membrane | 48.23 | 48.02 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 26.55 | 18.15 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 25.44 | 17.35 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 25.22 | 16.96 |
| AT3G16860.1 | Thale cress | plasma membrane | 24.34 | 16.85 |
| AT4G27110.1 | Thale cress | extracellular | 24.34 | 16.47 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:821245 | UniProt:A0A178VHK7 | ProteinID:AAF02128.1 | ProteinID:AEE73779.1 | EMBL:AK118555 |
| ArrayExpress:AT3G02210 | EnsemblPlantsGene:AT3G02210 | RefSeq:AT3G02210 | TAIR:AT3G02210 | RefSeq:AT3G02210-TAIR-G | EnsemblPlants:AT3G02210.1 |
| TAIR:AT3G02210.1 | EMBL:BT005373 | Symbol:COBL1 | InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | RefSeq:NP_186870.1 | ProteinID:OAP05168.1 | PFAM:PD140986 |
| PFAM:PF04833 | PIRSF:PIRSF038122 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | UniProt:Q9SRT7 | SignalP:SignalP-noTM |
| UniParc:UPI000000C61D | SEG:seg | : | : | : | : |
Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
Coordinates
chr3:-:409193..411873
Molecular Weight (calculated)
50365.4 Da
IEP (calculated)
9.247
GRAVY (calculated)
-0.139
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.