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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G379800.1 Wheat extracellular 98.43 98.43
TraesCS6D01G364400.1 Wheat extracellular 97.54 97.54
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.22 81.4
Zm00001d013256_P001 Maize extracellular 80.31 79.96
EER90860 Sorghum extracellular, golgi, plasma membrane 80.09 79.73
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 80.09 79.2
Zm00001d031479_P001 Maize cytosol, mitochondrion 28.86 78.66
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 73.38 71.93
KRH72178 Soybean mitochondrion 59.28 71.82
VIT_14s0083g01160.t01 Wine grape vacuole 69.57 71.33
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 72.04 70.46
Solyc02g065770.2.1 Tomato extracellular 69.8 70.27
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 71.81 70.09
PGSC0003DMT400068328 Potato extracellular 69.35 69.82
CDX86358 Canola extracellular 67.79 69.5
Bra025406.1-P Field mustard extracellular 67.79 69.5
CDX85277 Canola extracellular 67.56 69.27
PGSC0003DMT400003470 Potato extracellular 69.13 69.13
CDY70289 Canola extracellular 61.07 68.77
Solyc02g089120.2.1 Tomato extracellular 68.68 68.68
KRH54735 Soybean endoplasmic reticulum 69.8 68.42
KRH01360 Soybean extracellular, golgi, plasma membrane 68.46 68.3
KRH03165 Soybean extracellular 69.13 68.06
KRH45084 Soybean extracellular, golgi, plasma membrane 68.01 67.86
KRH63181 Soybean endoplasmic reticulum 69.13 67.76
Bra040587.1-P Field mustard extracellular 66.0 67.2
AT3G29810.1 Thale cress extracellular 66.0 66.89
KRG93684 Soybean extracellular, vacuole 67.34 66.3
GSMUA_Achr2P06240_001 Banana mitochondrion 70.69 66.25
KRH18352 Soybean plasma membrane 67.56 65.94
AT5G60920.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 66.22 64.91
CDX87193 Canola plasma membrane 65.55 64.25
CDY58691 Canola plasma membrane 65.55 63.97
CDY16831 Canola plasma membrane 65.55 63.97
TraesCS4B01G084800.1 Wheat extracellular 65.1 63.96
CDY02184 Canola plasma membrane 65.32 63.9
AT3G02210.1 Thale cress extracellular 64.43 63.72
Bra012996.1-P Field mustard plasma membrane 65.1 63.68
Bra035951.1-P Field mustard plasma membrane 64.88 63.32
Os10t0497700-01 Rice extracellular 59.96 63.06
TraesCS5B01G397000.2 Wheat extracellular 31.99 63.0
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 63.76 62.64
CDY60470 Canola plasma membrane 63.98 62.45
CDY43250 Canola plasma membrane 63.76 62.36
TraesCS2B01G201500.1 Wheat plasma membrane 63.98 62.31
TraesCS5B01G101400.1 Wheat extracellular 61.52 61.11
TraesCS2B01G201400.1 Wheat plasma membrane 60.4 60.27
CDY24004 Canola cytosol, nucleus, plastid 11.19 58.82
CDY42842 Canola cytosol 15.66 57.38
KRH56778 Soybean extracellular 26.62 56.94
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 53.02 56.7
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 14.99 54.47
CDY29033 Canola cytosol 21.25 52.2
TraesCS6B01G361700.1 Wheat plastid 22.37 45.25
TraesCS6B01G185800.1 Wheat cytosol, mitochondrion, nucleus, plastid 39.82 42.89
TraesCS2B01G406700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 40.04 41.72
CDY14723 Canola cytosol 26.62 37.42
TraesCS2B01G107700.1 Wheat plasma membrane 26.85 18.21
TraesCS4B01G187300.1 Wheat golgi 27.07 18.14
TraesCS7B01G037700.1 Wheat mitochondrion 27.29 18.1
Protein Annotations
EnsemblPlants:TraesCS6B01G418400.1EnsemblPlantsGene:TraesCS6B01G418400GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
PANTHER:PTHR31673PANTHER:PTHR31673:SF3PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122SEG:seg
SignalP:SignalP-noTMMapMan:21.1.2.2::::
Description
No Description!
Coordinates
chr6B:-:690558885..690561813
Molecular Weight (calculated)
49952.7 Da
IEP (calculated)
8.704
GRAVY (calculated)
-0.256
Length
447 amino acids
Sequence
(BLAST)
001: MAALAGSALL LLAAALLLSA PAATEAYDSL DPNGNITIKW DLKEWTPDGY VAMVTIYNYQ QFRHISAPGW QLGWTWAKKE VIWSMVGAQT TEQGDCSKFK
101: TNPPHCCKRD PTVIDLLPGT PYKDQVGNCC KGGVISTFNQ DPANAASFQI SVGLSGTTNK TVKLPKNFTL KTPGPGYTCG RATVVRPTKF LIGDRRRTTQ
201: ALMTWNVTCT YSQFLAQKTP TCCVALSSFY NNTIVGCPTC SCGCQNNNTH PGSCVNPNSP YLQSAIDGPG KYTGQPLVQC TSHMCPVKVH WHVKLNYKDY
301: WRVKVTITNF NYRMNYTDWN LVVQHPNFNN ITKLFSFNYK PLSPYGGRIN DSAMFWGMKF YNDLLNQAGP FGNAQTEILL QKDPETFTFE KGWAFPRRVY
401: FNGDNCVMPP PDAYPWLPNA SPPMKQPWTL ELLVFWTALA TLLAYYV
Best Arabidopsis Sequence Match ( AT3G29810.1 )
(BLAST)
001: MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
Arabidopsis Description
COBL3COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.