Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29033 | Canola | cytosol | 50.0 | 87.36 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 22.01 | 82.35 |
| CDY66895 | Canola | cytosol | 13.52 | 75.44 |
| Os03t0754500-00 | Rice | extracellular | 32.08 | 47.66 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 22.01 | 42.68 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 29.56 | 41.23 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 28.93 | 40.53 |
| CDY58695 | Canola | extracellular | 25.16 | 38.84 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 24.84 | 38.35 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 33.33 | 37.99 |
| CDX86358 | Canola | extracellular | 45.6 | 33.26 |
| Bra025406.1-P | Field mustard | extracellular | 45.6 | 33.26 |
| CDX85277 | Canola | extracellular | 44.34 | 32.34 |
| CDY70289 | Canola | extracellular | 39.31 | 31.49 |
| CDX90983 | Canola | extracellular | 39.94 | 29.2 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 40.88 | 29.02 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 40.57 | 28.79 |
| CDX87193 | Canola | plasma membrane | 40.88 | 28.51 |
| GSMUA_Achr4P01440_001 | Banana | extracellular, plasma membrane | 40.88 | 28.45 |
| CDY02184 | Canola | plasma membrane | 40.88 | 28.45 |
| GSMUA_Achr1P24500_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 40.88 | 28.38 |
| CDY16831 | Canola | plasma membrane | 40.88 | 28.38 |
| CDY58691 | Canola | plasma membrane | 40.88 | 28.38 |
| CDX69511 | Canola | plasma membrane | 40.25 | 28.13 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 40.25 | 28.07 |
| EER90860 | Sorghum | extracellular, golgi, plasma membrane | 39.62 | 28.06 |
| CDY43250 | Canola | plasma membrane | 40.25 | 28.01 |
| CDY60470 | Canola | plasma membrane | 40.25 | 27.95 |
| Zm00001d013256_P001 | Maize | extracellular | 39.31 | 27.84 |
| KRG93684 | Soybean | extracellular, vacuole | 39.62 | 27.75 |
| Os05t0386800-01 | Rice | extracellular | 39.62 | 27.57 |
| EER90859 | Sorghum | extracellular | 36.48 | 27.29 |
| KRH18352 | Soybean | plasma membrane | 38.99 | 27.07 |
| EER97506 | Sorghum | extracellular, plasma membrane | 38.99 | 27.07 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 38.36 | 26.99 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 37.42 | 26.62 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 38.36 | 26.52 |
| CDY26444 | Canola | plastid | 30.5 | 26.5 |
| TraesCS5A01G392000.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 38.05 | 26.48 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.05 | 26.48 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.05 | 26.48 |
| Os07t0604300-01 | Rice | extracellular | 37.11 | 26.46 |
| TraesCS6A01G379800.1 | Wheat | extracellular | 37.11 | 26.4 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 38.05 | 26.3 |
| Os03t0416300-01 | Rice | extracellular | 37.74 | 26.2 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 36.79 | 26.17 |
| Os10t0497700-01 | Rice | extracellular | 34.91 | 26.12 |
| GSMUA_Achr2P06240_001 | Banana | mitochondrion | 38.99 | 26.0 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 37.42 | 25.7 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 37.11 | 25.6 |
| KRH72178 | Soybean | mitochondrion | 29.56 | 25.47 |
| TraesCS4A01G231200.1 | Wheat | extracellular | 36.79 | 25.43 |
| TraesCS2A01G175100.1 | Wheat | extracellular | 36.16 | 25.39 |
| OQU92393 | Sorghum | extracellular | 36.79 | 25.38 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 37.11 | 25.11 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 35.85 | 25.05 |
| TraesCS2D01G182500.1 | Wheat | golgi | 35.22 | 24.62 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 35.22 | 24.4 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 34.91 | 23.52 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 33.65 | 23.41 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 28.3 | 21.53 |
| CDX93481 | Canola | plasma membrane | 28.62 | 20.73 |
| CDY31063 | Canola | plasma membrane | 25.79 | 18.89 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 25.79 | 18.02 |
| CDX87194 | Canola | mitochondrion | 11.64 | 17.7 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 41.2 | 15.27 |
| CDX94950 | Canola | nucleus | 25.79 | 14.39 |
| TraesCS3A01G409900.1 | Wheat | plastid | 9.43 | 10.83 |
| CDY42842 | Canola | cytosol | 4.09 | 10.66 |
| CDY19626 | Canola | mitochondrion | 13.52 | 10.44 |
| CDY26445 | Canola | cytosol | 4.72 | 8.88 |
| CDY09102 | Canola | cytosol | 7.23 | 8.81 |
| CDY00037 | Canola | plasma membrane | 17.61 | 8.46 |
| CDY49611 | Canola | plasma membrane | 17.61 | 8.46 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.61 | 8.42 |
| CDY34424 | Canola | plasma membrane | 16.98 | 8.19 |
| CDY32210 | Canola | plasma membrane | 16.98 | 8.18 |
| CDY36030 | Canola | vacuole | 16.67 | 8.18 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.98 | 8.1 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 16.35 | 7.82 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 16.35 | 7.82 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 16.35 | 7.78 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 16.04 | 7.69 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.35 | 7.61 |
| CDY55591 | Canola | plasma membrane | 16.67 | 6.37 |
| CDY43072 | Canola | plasma membrane | 16.67 | 6.27 |
| CDY57659 | Canola | cytosol | 1.89 | 3.92 |
Protein Annotations
| EnsemblPlants:CDY14723 | EnsemblPlantsGene:GSBRNA2T00084542001 | GO:A0A078FQW8 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| InterPro:COBRA_pln | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | PFAM:PD140986 | PFAM:PF04833 | ProteinID:CDY14723 |
| ProteinID:CDY14723.1 | SEG:seg | UniParc:UPI0004EDF450 | UniProt:A0A078FQW8 | MapMan:21.1.2.2 | : |
Description
BnaC05g19800DBnaC05g19800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQW8]
Coordinates
chrLK032046:-:572108..574868
Molecular Weight (calculated)
35990.0 Da
IEP (calculated)
6.880
GRAVY (calculated)
-0.681
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGCYQGDR HGDRHVGDFH LEEDQSPQHH PLHRHDRAYD ALDPAGNITI KWDIVSWTAD GYVAVVSIFN FQQYRHIQAP SWQLGWSWYK KEVIWSMVGA
101: QATEQGDCSK FKGNIHHCCK KTPTVVDLLP GTPYNQQMLN SCRGGVISSW AQNPTTAVGR TTSSRSCNLH NHTPFDTASP PPPPPPSLPS AIASQIRLHQ
201: SRHHHRHARH NHHSALCLSL SVSYSLCIEK EARGTHQWQT LTEAEEPEDI FQVDGEVSKL SRRLNGLCFF NDGVSFMESL ILEEDRGYLA VGTLDGVGVE
301: QDRREEMELV QKRGKRDT
101: QATEQGDCSK FKGNIHHCCK KTPTVVDLLP GTPYNQQMLN SCRGGVISSW AQNPTTAVGR TTSSRSCNLH NHTPFDTASP PPPPPPSLPS AIASQIRLHQ
201: SRHHHRHARH NHHSALCLSL SVSYSLCIEK EARGTHQWQT LTEAEEPEDI FQVDGEVSKL SRRLNGLCFF NDGVSFMESL ILEEDRGYLA VGTLDGVGVE
301: QDRREEMELV QKRGKRDT
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.