Factsheet for VIT_03s0038g01430.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
plasma membrane 3
mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004139	Potato	extracellular	67.27	53.88
KRH51434	Soybean	endoplasmic reticulum, plasma membrane, vacuole	66.06	24.49
KRH60734	Soybean	plasma membrane	65.45	24.16
Solyc01g111050.2.1	Tomato	cytosol	67.88	23.88
VIT_17s0000g05050.t01	Wine grape	cytosol	8.48	23.33
VIT_12s0035g00630.t01	Wine grape	extracellular, plasma membrane	46.67	17.87
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	48.48	17.54
VIT_14s0083g01160.t01	Wine grape	vacuole	45.45	17.2
VIT_14s0083g01150.t01	Wine grape	plasma membrane	41.21	15.78
VIT_17s0000g05060.t01	Wine grape	plasma membrane	41.82	7.41
VIT_05s0077g01470.t01	Wine grape	plasma membrane	23.64	5.99
VIT_07s0005g01020.t01	Wine grape	plasma membrane	23.03	5.87
VIT_10s0116g00620.t01	Wine grape	extracellular	23.03	5.81
VIT_19s0177g00160.t01	Wine grape	plasma membrane	21.82	5.5
VIT_03s0038g01420.t01	Wine grape	extracellular, plasma membrane	1.82	1.2

Protein Annotations

ArrayExpress:VIT_03s0038g01430	EMBL:FN596508	EnsemblPlants:VIT_03s0038g01430.t01	EnsemblPlantsGene:VIT_03s0038g01430	GO:GO:0005575	GO:GO:0008150
GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225
GO:GO:0040007	InterPro:COBRA_pln	PANTHER:PTHR31673	PANTHER:PTHR31673:SF9	ProteinID:CBI37941	ProteinID:CBI37941.3
SEG:seg	UniParc:UPI0001BE4C43	UniProt:D7U5C2	MapMan:21.1.2.2	:	:

Description

No Description!

Coordinates

chr3:+:993344..994100

Molecular Weight (calculated)

18936.7 Da

IEP (calculated)

8.086

GRAVY (calculated)

-0.119

Length

165 amino acids

Sequence
(BLAST)

001: MCPIRVHWHV KNNYMSHWRV KLTISNYNLA KNYSDWNILV QHPGFSQNTT TYSFNSTALP TVGFADEIAL FWGVTFYNNE LLHADDKKLG SVTTEILLGK
101: DSNSFTLNGG WAFPRRIYFN GENCEMPLPD TYPMLPNGSS TQKLTHPQFF LLLLCLTVKV LAIWL

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.