CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G537900.1	Wheat	plastid	52.73	48.74
EES04210	Sorghum	plastid	49.09	18.95
Solyc02g068640.2.1	Tomato	plastid	34.55	13.77
GSMUA_Achr11P...	Banana	plastid	33.64	13.55
CDY27299	Canola	cytosol	11.82	13.54
PGSC0003DMT400027071	Potato	cytosol	30.91	12.41
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	30.91	12.32
KRH66795	Soybean	plastid	30.0	12.04
KRG95119	Soybean	nucleus	28.18	11.31
AT5G14800.1	Thale cress	cytosol	28.18	11.23
CDY09887	Canola	plastid	26.36	10.51
CDX69556	Canola	plastid	26.36	10.51
CDX70578	Canola	cytosol	25.45	10.14
Bra008735.1-P	Field mustard	plastid	25.45	10.14
CDX78596	Canola	cytosol	24.55	9.78
CDX98268	Canola	plastid	4.55	6.33
CDY19454	Canola	plastid	12.73	6.14
Bra006270.1-P	Field mustard	cytosol	24.55	6.14
CDY09317	Canola	cytosol	11.82	5.73
CDY27300	Canola	cytosol	0.0	0.0
CDY12196	Canola	cytosol	0.0	0.0
CDX98267	Canola	cytosol	0.0	0.0
CDX80713	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:KXG25246	EnsemblPlantsGene:SORBI_3007G143600	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:P5C_Rdtase_cat_N	PFAM:PF03807
ProteinID:KXG25246	ProteinID:KXG25246.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00081AB788	UniProt:A0A1B6PHT0
MapMan:4.1.1.1.4.1.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:57324960..57326077

Molecular Weight (calculated)

11552.1 Da

IEP (calculated)

7.553

GRAVY (calculated)

0.232

Length

110 amino acids

Sequence
(BLAST)

001: MATPPVQPVP PVVAVAALNA DVFRLGFVGA ATWPRASPAA WRRRASSQPP PSAPHPTAAP SAAVDDGDVI VISVKPQMVK QVLLELGPRL SEEKILVSIV
101: AGIEMQDLQM

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.