CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09317	Canola	cytosol	95.18	95.59
CDY27300	Canola	cytosol	41.23	92.16
CDX98267	Canola	cytosol	39.91	85.85
CDY27299	Canola	cytosol	35.96	85.42
CDX98268	Canola	plastid	28.07	81.01
CDX69556	Canola	plastid	92.11	76.09
Bra008735.1-P	Field mustard	plastid	91.67	75.72
CDY09887	Canola	plastid	91.23	75.36
CDY12196	Canola	cytosol	21.49	73.13
CDX78596	Canola	cytosol	83.33	68.84
CDX70578	Canola	cytosol	83.33	68.84
CDX80713	Canola	cytosol	20.18	68.66
KRG95119	Soybean	nucleus	70.61	58.76
KRH66795	Soybean	plastid	70.18	58.39
PGSC0003DMT400027071	Potato	cytosol	68.86	57.3
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	66.67	55.07
Solyc02g068640.2.1	Tomato	plastid	66.67	55.07
GSMUA_Achr11P...	Banana	plastid	62.28	52.01
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	61.4	48.78
TraesCS3B01G538100.1	Wheat	golgi	60.96	48.43
TraesCS3D01G483400.1	Wheat	golgi	60.96	48.26
EES04210	Sorghum	plastid	60.09	48.07
Zm00001d042117_P002	Maize	plastid	60.09	47.74
Os01t0948400-01	Rice	plasma membrane	59.21	47.37
TraesCS2B01G537900.1	Wheat	plastid	8.77	16.81
KXG25246	Sorghum	plastid	6.14	12.73

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078G1V3
UniProt:A0A078G1V3	EnsemblPlants:CDY19454	ProteinID:CDY19454	ProteinID:CDY19454.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004735	GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00009027001	HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N
PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF46
MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735
UniPathway:UPA00098	UniParc:UPI0004EE3AF1	SEG:seg	:	:	:

Description

BnaC04g11450DBnaC04g11450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1V3]

Coordinates

chrLK032096:+:259128..260385

Molecular Weight (calculated)

23753.4 Da

IEP (calculated)

5.688

GRAVY (calculated)

0.086

Length

228 amino acids

Sequence
(BLAST)

001: METLPISAES FKVGFIGAGK MAESIARGVV ASGMLPQNRN STAVHSNLNH RQVFESFGVN VFSSSEEVVK ESDVVIFSVK PQVDRFVRVM PNTPAAVGEA
101: ASVMSLGTAA TEEDGALVAK LFGSVGKMFK VDEKMFDAVT CLSGSGPAYI FLAIEALADG GVAAGLPREL ALGLASQTVF GRATMVSKTG KHPGVLKDDV
201: TSPGGTTIAG VHELEKGSWS CNNGEQNR

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.