Factsheet for Solyc02g068640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027071	Potato	cytosol	94.93	95.62
KRG95119	Soybean	nucleus	75.0	75.55
KRH66795	Soybean	plastid	73.91	74.45
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	73.91	73.91
AT5G14800.1	Thale cress	cytosol	73.55	73.55
CDY27300	Canola	cytosol	27.17	73.53
CDX98267	Canola	cytosol	27.9	72.64
CDY09887	Canola	plastid	72.46	72.46
CDX69556	Canola	plastid	72.46	72.46
Bra008735.1-P	Field mustard	plastid	72.1	72.1
CDY12196	Canola	cytosol	17.39	71.64
CDX78596	Canola	cytosol	70.65	70.65
GSMUA_Achr11P...	Banana	plastid	69.57	70.33
CDX70578	Canola	cytosol	70.29	70.29
CDX80713	Canola	cytosol	16.3	67.16
CDY09317	Canola	cytosol	55.07	66.96
CDY19454	Canola	plastid	55.07	66.67
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	69.2	66.55
EES04210	Sorghum	plastid	68.48	66.32
TraesCS3D01G483400.1	Wheat	golgi	68.48	65.62
TraesCS3B01G538100.1	Wheat	golgi	68.12	65.51
Zm00001d042117_P002	Maize	plastid	68.12	65.51
Os01t0948400-01	Rice	plasma membrane	67.39	65.26
CDY27299	Canola	cytosol	19.2	55.21
CDX98268	Canola	plastid	13.41	46.84
Bra006270.1-P	Field mustard	cytosol	70.65	44.32
TraesCS2B01G537900.1	Wheat	plastid	17.03	39.5
KXG25246	Sorghum	plastid	13.77	34.55

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004735	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006561
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0030312	GO:GO:0055114	UniProt:K4B7J6	HAMAP:MF_01925
InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N	PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193
PANTHER:PTHR11645	PANTHER:PTHR11645:SF0	InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc02g068640.2
EnsemblPlants:Solyc02g068640.2.1	TIGRFAMs:TIGR00112	UniParc:UPI0002767B05	:	:	:

Description

Pyrroline-5-carboxylate reductase [Source:Projected from Arabidopsis thaliana (AT5G14800) UniProtKB/Swiss-Prot;Acc:P54904]

Coordinates

chr2:+:38594914..38602373

Molecular Weight (calculated)

28604.6 Da

IEP (calculated)

9.047

GRAVY (calculated)

0.149

Length

276 amino acids

Sequence
(BLAST)

001: MANVCPIPTD SYKLGFIGAG KMAESIARGV VKSGILPASR IRTAHSGSAR RTAFESIGVT VLDNNSQVVE DSDVIIFSVK PQVVKNVVSE LKPILSEKKL
101: LVSVAAGIKL KDLQEWAGQG RFIRVMPNTP SAVGEAATVI TLGEKATTED GELISQLFGA IGKVWKADEK LFDAVTGLSG SGPAYVFLAI EALADGGVAA
201: GLPRELALGL ASQTVLGAAS MVSGMSKHPG QHKDDVASPG GTTIAGIHEL EKSGFRGILM NAVVAAAKRS KELSQN

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.