CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008735.1-P	Field mustard	plastid	99.64	99.64
CDY09887	Canola	plastid	98.55	98.55
CDY09317	Canola	cytosol	76.09	92.51
CDY19454	Canola	plastid	76.09	92.11
CDX70578	Canola	cytosol	90.58	90.58
CDX78596	Canola	cytosol	90.58	90.58
CDX98267	Canola	cytosol	34.42	89.62
CDY27300	Canola	cytosol	32.25	87.25
CDY27299	Canola	cytosol	29.71	85.42
CDX98268	Canola	plastid	23.55	82.28
CDY12196	Canola	cytosol	18.48	76.12
KRG95119	Soybean	nucleus	75.36	75.91
KRH66795	Soybean	plastid	74.64	75.18
PGSC0003DMT400027071	Potato	cytosol	72.83	73.36
Solyc02g068640.2.1	Tomato	plastid	72.46	72.46
CDX80713	Canola	cytosol	17.39	71.64
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	70.65	70.65
GSMUA_Achr11P...	Banana	plastid	66.67	67.4
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	65.94	63.41
EES04210	Sorghum	plastid	65.22	63.16
TraesCS3B01G538100.1	Wheat	golgi	65.58	63.07
TraesCS3D01G483400.1	Wheat	golgi	65.58	62.85
Zm00001d042117_P002	Maize	plastid	64.86	62.37
Os01t0948400-01	Rice	plasma membrane	64.13	62.11
TraesCS2B01G537900.1	Wheat	plastid	13.77	31.93
KXG25246	Sorghum	plastid	10.51	26.36

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078BXT5
EnsemblPlants:CDX69556	ProteinID:CDX69556	ProteinID:CDX69556.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004735
GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0055114
GO:GO:0055129	EnsemblPlantsGene:GSBRNA2T00135564001	HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N
PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF0
MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735
TIGRFAMs:TIGR00112	UniPathway:UPA00098	UniParc:UPI0004EE233B	SEG:seg	:	:

Description

BnaA10g19050D

Coordinates

chrLK031790:+:800759..802355

Molecular Weight (calculated)

28711.7 Da

IEP (calculated)

8.950

GRAVY (calculated)

0.155

Length

276 amino acids

Sequence
(BLAST)

001: METLPISAES FKVGFIGAGK MAESIARGVV ASGMLPPNRI STAVHSNLNR RQVFESFGVN VFSSSEEVVR ESDVVIFSVK PQVVKKAITE VRSKLSKDKV
101: LVSVAAGIKL KDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTAATEED GALVAKLFGS VGKMFKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALGL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAADRS RELSQS

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.