CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042117_P002	Maize	plastid	98.25	97.56
TraesCS3D01G483400.1	Wheat	golgi	86.67	85.76
TraesCS3B01G538100.1	Wheat	golgi	86.32	85.71
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	84.56	83.97
Os01t0948400-01	Rice	plasma membrane	83.51	83.51
GSMUA_Achr11P...	Banana	plastid	74.39	77.66
CDY27300	Canola	cytosol	26.32	73.53
CDX98267	Canola	cytosol	26.32	70.75
Solyc02g068640.2.1	Tomato	plastid	66.32	68.48
PGSC0003DMT400027071	Potato	cytosol	64.91	67.52
KRG95119	Soybean	nucleus	64.91	67.52
KRH66795	Soybean	plastid	63.86	66.42
AT5G14800.1	Thale cress	cytosol	63.86	65.94
CDY12196	Canola	cytosol	15.44	65.67
CDX69556	Canola	plastid	63.16	65.22
CDX70578	Canola	cytosol	63.16	65.22
Bra008735.1-P	Field mustard	plastid	63.16	65.22
CDY09887	Canola	plastid	62.81	64.86
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	62.81	64.86
CDX78596	Canola	cytosol	62.11	64.13
CDX80713	Canola	cytosol	14.39	61.19
CDY09317	Canola	cytosol	48.42	60.79
CDY19454	Canola	plastid	48.07	60.09
KXG25246	Sorghum	plastid	18.95	49.09
CDY27299	Canola	cytosol	14.04	41.67
Bra006270.1-P	Field mustard	cytosol	61.75	40.0
CDX98268	Canola	plastid	9.12	32.91

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	EntrezGene:8081331
UniProt:C5XHU2	EnsemblPlants:EES04210	ProteinID:EES04210	ProteinID:EES04210.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004735	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006561	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	GO:GO:0055129
HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N	PFAM:PF03807	PFAM:PF14748
PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF0	MetaCyc:PWY-3341	MetaCyc:PWY-4981
MetaCyc:PWY-6344	InterPro:Pyrroline-COOH_reductase	EnsemblPlantsGene:SORBI_3003G424300	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00112
UniParc:UPI0001A8572B	RefSeq:XP_002459090.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72845339..72848634

Molecular Weight (calculated)

29580.8 Da

IEP (calculated)

8.489

GRAVY (calculated)

0.161

Length

285 amino acids

Sequence
(BLAST)

001: MAAPPVQPVP PAAAAAVNGD AFRLGFVGAG NLAESIARGV AASGVLPASA IRTAPHRRPE RGEAFASFGA CLLQTNAQVV DDSDVIVISV KPQIVKQVLL
101: ELRPRLSEEK LLVSIAAGIK MQDLQDWSGQ RRIIRVMPNT PSAVGQAASV MCLGEMATQD DENRVRKLFS AIGKVWTAEE KYFDAVTGLS GSGPAYIFLA
201: IEAMADGGVA AGLPRDLALG LASQTVLGAA TMVSQTGKHP GQLKDQVTSP AGTTIAGIQE LEKGAFRGTL ISAVVAAAKR CRELS

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.