CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98268	Canola	plastid	68.75	83.54
CDY09317	Canola	cytosol	85.42	36.12
CDY19454	Canola	plastid	85.42	35.96
CDX69556	Canola	plastid	85.42	29.71
CDY09887	Canola	plastid	85.42	29.71
Bra008735.1-P	Field mustard	plastid	84.38	29.35
CDX78596	Canola	cytosol	67.71	23.55
CDX70578	Canola	cytosol	66.67	23.19
KRG95119	Soybean	nucleus	61.46	21.53
KRH66795	Soybean	plastid	60.42	21.17
PGSC0003DMT400027071	Potato	cytosol	58.33	20.44
Solyc02g068640.2.1	Tomato	plastid	55.21	19.2
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	52.08	18.12
GSMUA_Achr11P...	Banana	plastid	47.92	16.85
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	42.71	14.29
TraesCS2B01G537900.1	Wheat	plastid	17.71	14.29
EES04210	Sorghum	plastid	41.67	14.04
TraesCS3B01G538100.1	Wheat	golgi	41.67	13.94
Zm00001d042117_P002	Maize	plastid	41.67	13.94
TraesCS3D01G483400.1	Wheat	golgi	41.67	13.89
Os01t0948400-01	Rice	plasma membrane	39.58	13.33
KXG25246	Sorghum	plastid	13.54	11.82
CDX98267	Canola	cytosol	4.17	3.77
CDY12196	Canola	cytosol	2.08	2.99
CDX80713	Canola	cytosol	2.08	2.99
CDY27300	Canola	cytosol	2.08	1.96

Protein Annotations

EnsemblPlants:CDY27299	EnsemblPlantsGene:GSBRNA2T00037219001	Gene3D:3.40.50.720	GO:A0A078GQ15	InterPro:NAD(P)-bd_dom_sf	InterPro:P5C_Rdtase_cat_N
KEGG:00330+1.5.1.2	MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	PANTHER:PTHR11645	PANTHER:PTHR11645:SF0
PFAM:PF03807	ProteinID:CDY27299	ProteinID:CDY27299.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EF3D61
UniPathway:UPA00098	UniProt:A0A078GQ15	MapMan:4.1.1.1.4.1.2	:	:	:

Description

BnaC04g18790DBnaC04g18790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQ15]

Coordinates

chrLK032202:+:465840..466403

Molecular Weight (calculated)

10458.6 Da

IEP (calculated)

10.596

GRAVY (calculated)

-0.011

Length

96 amino acids

Sequence
(BLAST)

1: METLPISAES FKVRFIGAGK MVESIARGVV ASGMLPPNRN STAVHSNLNR RQVFESFGVN VFSSSEEVVK ESDVVIFSVK PQVGMVWSRS VRKGDA

Best Arabidopsis Sequence Match ( AT5G14800.2 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVSSWSC NDG

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.