Factsheet for VIT_08s0007g05600.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 5
plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027071	Potato	cytosol	75.36	75.91
KRH66795	Soybean	plastid	74.28	74.82
KRG95119	Soybean	nucleus	73.55	74.09
Solyc02g068640.2.1	Tomato	plastid	73.91	73.91
CDX98267	Canola	cytosol	27.9	72.64
AT5G14800.1	Thale cress	cytosol	72.1	72.1
CDX78596	Canola	cytosol	70.65	70.65
CDX69556	Canola	plastid	70.65	70.65
CDY27300	Canola	cytosol	26.09	70.59
CDY09887	Canola	plastid	70.29	70.29
Bra008735.1-P	Field mustard	plastid	70.29	70.29
CDX70578	Canola	cytosol	69.93	69.93
CDY09317	Canola	cytosol	55.43	67.4
CDY19454	Canola	plastid	55.07	66.67
GSMUA_Achr11P...	Banana	plastid	65.94	66.67
CDY12196	Canola	cytosol	15.58	64.18
Os01t0948400-01	Rice	plasma membrane	64.86	62.81
EES04210	Sorghum	plastid	64.86	62.81
Zm00001d042117_P002	Maize	plastid	64.49	62.02
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	64.13	61.67
TraesCS3D01G483400.1	Wheat	golgi	63.77	61.11
TraesCS3B01G538100.1	Wheat	golgi	63.41	60.98
CDX80713	Canola	cytosol	14.49	59.7
CDY27299	Canola	cytosol	18.12	52.08
CDX98268	Canola	plastid	12.68	44.3
Bra006270.1-P	Field mustard	cytosol	68.84	43.18
TraesCS2B01G537900.1	Wheat	plastid	15.22	35.29
KXG25246	Sorghum	plastid	12.32	30.91

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	EntrezGene:100852984	wikigene:100852984	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2
InterPro:6-PGluconate_DH-like_C_sf	ProteinID:CBI30087	ProteinID:CBI30087.3	UniProt:D7TIL1	EMBL:FN595991	GO:GO:0003674
GO:GO:0003824	GO:GO:0004735	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006561
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009408
GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016491	GO:GO:0030312	GO:GO:0055114
GO:GO:0055129	EntrezGene:LOC100852984	wikigene:LOC100852984	HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer
InterPro:P5C_Rdtase_cat_N	PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645
PANTHER:PTHR11645:SF46	InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGR:TC66343	TIGRFAMs:TIGR00112
UniParc:UPI00015CD472	ArrayExpress:VIT_08s0007g05600	EnsemblPlantsGene:VIT_08s0007g05600	EnsemblPlants:VIT_08s0007g05600.t01	unigene:Vvi.17892	RefSeq:XP_003632728
RefSeq:XP_003632728.1	SEG:seg	:	:	:	:

Description

Pyrroline-5-carboxylate reductase [Source:UniProtKB/TrEMBL;Acc:D7TIL1]

Coordinates

chr8:+:19489478..19499496

Molecular Weight (calculated)

28818.0 Da

IEP (calculated)

8.825

GRAVY (calculated)

0.186

Length

276 amino acids

Sequence
(BLAST)

001: MAGVAPIPMD TFKLGFIGAG KMAESIAKGV VHSGLMPASR ISTAPRSSSR QDAFESLGVK IFETNQRVVE DSDVVVFSVK PQVVEDVVLE LRPLLTKKKL
101: LVSVVAGVKL KHLQEWAGHS RFIRVMPNTP AAVGKAASVM SLGKSATEED GGLIANLFGA IGKIWRADEK YFDAVTGLSG SGPAYIYIAI EALADGGVAA
201: GLPRELAWNL ASQTVLGAAD MAISTGKHPG QLKDDVASPG GTTIAGIYEL EKGGFRGILM NAVVAAAKRS LDLSES

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.