Factsheet for Zm00001d042117_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04210	Sorghum	plastid	97.56	98.25
TraesCS3D01G483400.1	Wheat	golgi	85.02	84.72
TraesCS3B01G538100.1	Wheat	golgi	84.67	84.67
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	82.93	82.93
Os01t0948400-01	Rice	plasma membrane	82.23	82.81
GSMUA_Achr11P...	Banana	plastid	73.17	76.92
CDY27300	Canola	cytosol	26.13	73.53
CDX98267	Canola	cytosol	26.13	70.75
Solyc02g068640.2.1	Tomato	plastid	65.51	68.12
PGSC0003DMT400027071	Potato	cytosol	64.81	67.88
KRG95119	Soybean	nucleus	64.46	67.52
KRH66795	Soybean	plastid	63.41	66.42
CDY12196	Canola	cytosol	15.33	65.67
AT5G14800.1	Thale cress	cytosol	63.07	65.58
CDX70578	Canola	cytosol	62.37	64.86
CDX69556	Canola	plastid	62.37	64.86
Bra008735.1-P	Field mustard	plastid	62.37	64.86
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	62.02	64.49
CDY09887	Canola	plastid	62.02	64.49
CDX78596	Canola	cytosol	61.32	63.77
CDX80713	Canola	cytosol	14.29	61.19
CDY09317	Canola	cytosol	48.08	60.79
CDY19454	Canola	plastid	47.74	60.09
CDY27299	Canola	cytosol	13.94	41.67
Bra006270.1-P	Field mustard	cytosol	60.98	39.77
CDX98268	Canola	plastid	9.06	32.91

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	EntrezGene:606449
EMBL:BT037020	EMBL:DQ026301	EMBL:EU968742	GO:GO:0003674	GO:GO:0003824	GO:GO:0004735
GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006561	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	GO:GO:0055129	HAMAP:MF_01925
InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM34570.1	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N	PFAM:PF03807	PFAM:PF14748
PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF0	InterPro:Pyrroline-COOH_reductase	UniProt:Q4TZJ2
SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00112	UniParc:UPI000051B071	EnsemblPlantsGene:Zm00001d042117	EnsemblPlants:Zm00001d042117_P002
EnsemblPlants:Zm00001d042117_T002	SEG:seg	:	:	:	:

Description

Pyrroline-5-carboxylate reductase

Coordinates

chr3:+:151572267..151577836

Molecular Weight (calculated)

29734.1 Da

IEP (calculated)

9.632

GRAVY (calculated)

0.175

Length

287 amino acids

Sequence
(BLAST)

001: MAAPPVQPVP TAAAAAAAVN GDAFRLGFVG AGNLAESIAR GVAASGVLPA SAIRTAPHRR PERGEAFASF GACLLQTNAH VVDDSDVIVI SVKPQIVKQV
101: LLQLRPRLSE KKLLVSIAAG IKMQDLQDWS GQRRIIRVMP NTPSAVGQAA SVMCLGEMAT QDDENRVRKL FSAIGKVWTA EEKYFDAVTG LSGSGPAYIF
201: LAIEAMADGG VAAGLPRDLA LGLASQTVLG AATMVSQTGK HPGQLKDQVT SPAGTTIAGI QELEKGAFRG TLISAVVAAA KRCRELS

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.