CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19454	Canola	plastid	95.59	95.18
CDY27300	Canola	cytosol	42.29	94.12
CDX98267	Canola	cytosol	40.97	87.74
CDY27299	Canola	cytosol	36.12	85.42
CDX98268	Canola	plastid	28.63	82.28
CDX69556	Canola	plastid	92.51	76.09
Bra008735.1-P	Field mustard	plastid	92.07	75.72
CDY09887	Canola	plastid	91.63	75.36
CDY12196	Canola	cytosol	21.59	73.13
CDX78596	Canola	cytosol	84.14	69.2
CDX70578	Canola	cytosol	84.14	69.2
CDX80713	Canola	cytosol	20.26	68.66
KRG95119	Soybean	nucleus	71.81	59.49
KRH66795	Soybean	plastid	71.37	59.12
PGSC0003DMT400027071	Potato	cytosol	69.16	57.3
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	67.4	55.43
Solyc02g068640.2.1	Tomato	plastid	66.96	55.07
GSMUA_Achr11P...	Banana	plastid	63.0	52.38
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	62.56	49.48
TraesCS3B01G538100.1	Wheat	golgi	61.67	48.78
TraesCS3D01G483400.1	Wheat	golgi	61.67	48.61
EES04210	Sorghum	plastid	60.79	48.42
Zm00001d042117_P002	Maize	plastid	60.79	48.08
Os01t0948400-01	Rice	plasma membrane	59.91	47.72
TraesCS2B01G537900.1	Wheat	plastid	8.81	16.81
KXG25246	Sorghum	plastid	5.73	11.82

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078F884
UniProt:A0A078F884	EnsemblPlants:CDY09317	ProteinID:CDY09317	ProteinID:CDY09317.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004735	GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00001624001	HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N
PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF0
MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735
UniPathway:UPA00098	UniParc:UPI0004EDF634	:	:	:	:

Description

BnaC03g63470DBnaC03g63470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F884]

Coordinates

chrLK031994:-:749030..750284

Molecular Weight (calculated)

23426.0 Da

IEP (calculated)

5.066

GRAVY (calculated)

0.104

Length

227 amino acids

Sequence
(BLAST)

001: METLPISAES FEVGFIGAGK MAESIARGVV ASGMLPPNRN STAVHSNLNR RQVFESFGVN VFSSSEEVIK ESDVVIFSVK PQVDRFVRVM PNTPAAVGEA
101: ASVMSLGTAA TEEDGALVAK LFGSVGKMFK ADEKMFDAVT GLSGSGPAYI FLAIEALADG GVAAGLPRKL AFGLASQTVL GGATMVSKTG KHPGVLKDDV
201: TSPGGTTIAG VHELEKGSWS CNNGEQN

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.