Factsheet for TraesCS3B01G538100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G483400.1	Wheat	golgi	95.12	94.79
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	92.68	92.68
EES04210	Sorghum	plastid	85.71	86.32
Zm00001d042117_P002	Maize	plastid	84.67	84.67
Os01t0948400-01	Rice	plasma membrane	81.53	82.11
CDY27300	Canola	cytosol	26.83	75.49
GSMUA_Achr11P...	Banana	plastid	71.78	75.46
CDX98267	Canola	cytosol	26.13	70.75
Solyc02g068640.2.1	Tomato	plastid	65.51	68.12
KRG95119	Soybean	nucleus	64.46	67.52
PGSC0003DMT400027071	Potato	cytosol	64.11	67.15
KRH66795	Soybean	plastid	63.76	66.79
AT5G14800.1	Thale cress	cytosol	63.41	65.94
CDY09887	Canola	plastid	63.07	65.58
CDX69556	Canola	plastid	63.07	65.58
Bra008735.1-P	Field mustard	plastid	63.07	65.58
CDX70578	Canola	cytosol	62.72	65.22
CDY12196	Canola	cytosol	14.98	64.18
CDX78596	Canola	cytosol	61.67	64.13
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	60.98	63.41
CDY09317	Canola	cytosol	48.78	61.67
CDY19454	Canola	plastid	48.43	60.96
CDX80713	Canola	cytosol	13.94	59.7
TraesCS2B01G537900.1	Wheat	plastid	21.95	52.94
CDY27299	Canola	cytosol	13.94	41.67
Bra006270.1-P	Field mustard	cytosol	61.67	40.23
CDX98268	Canola	plastid	9.06	32.91

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004735	GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0055114	HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N
PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF0
InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735	TIGRFAMs:TIGR00112	EnsemblPlantsGene:TraesCS3B01G538100	EnsemblPlants:TraesCS3B01G538100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:777989820..777992346

Molecular Weight (calculated)

29355.5 Da

IEP (calculated)

9.185

GRAVY (calculated)

0.149

Length

287 amino acids

Sequence
(BLAST)

001: MAAAPPQPAA PAPGPANGGD AFRLGFVGAG NLAESIARGV AASGVLPASA VRTAPHRRPE RGAAFASLGA TILASNAQVV DGSDVIVISV KPQIVKQVLV
101: ELKPLLSEEK LLVSIAAGIK MKDLQDWSGQ RRIIRVMPNT PSAVGQAASV MCLGETATEK DENRVKSLFS AIGKVWTAEE KYFDAVTGLS GSGPAYIFLA
201: IEAMADGGVA AGLPRDLALG LAAQTVLGAA TMVSETGKHP GQLKDQVTSP AGTTIAGVHE LEKGSFRGTL INAVVAATTR CRELSKN

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.