CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78596	Canola	cytosol	97.1	97.1
CDX69556	Canola	plastid	90.58	90.58
CDY09887	Canola	plastid	89.86	89.86
CDX98267	Canola	cytosol	34.06	88.68
CDY27300	Canola	cytosol	32.25	87.25
AT5G14800.1	Thale cress	cytosol	86.96	86.96
CDY09317	Canola	cytosol	69.2	84.14
CDY19454	Canola	plastid	68.84	83.33
CDY12196	Canola	cytosol	18.48	76.12
KRG95119	Soybean	nucleus	73.91	74.45
KRH66795	Soybean	plastid	73.55	74.09
CDX80713	Canola	cytosol	17.39	71.64
PGSC0003DMT400027071	Potato	cytosol	70.65	71.17
Solyc02g068640.2.1	Tomato	plastid	70.29	70.29
VIT_08s0007g05600.t01	Wine grape	cytosol, plastid	69.93	69.93
GSMUA_Achr11P...	Banana	plastid	66.3	67.03
CDY27299	Canola	cytosol	23.19	66.67
Os01t0948400-01	Rice	plasma membrane	65.22	63.16
EES04210	Sorghum	plastid	65.22	63.16
HORVU3Hr1G106720.2	Barley	mitochondrion, plastid	65.22	62.72
TraesCS3B01G538100.1	Wheat	golgi	65.22	62.72
TraesCS3D01G483400.1	Wheat	golgi	65.22	62.5
Zm00001d042117_P002	Maize	plastid	64.86	62.37
CDX98268	Canola	plastid	17.03	59.49
TraesCS2B01G537900.1	Wheat	plastid	13.04	30.25
KXG25246	Sorghum	plastid	10.14	25.45

Protein Annotations

KEGG:00330+1.5.1.2	Gene3D:1.10.3730.10	Gene3D:3.40.50.720	MapMan:4.1.1.1.4.1.2	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078C6H8
EnsemblPlants:CDX70578	ProteinID:CDX70578	ProteinID:CDX70578.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004735
GO:GO:0006561	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0055114
GO:GO:0055129	EnsemblPlantsGene:GSBRNA2T00140419001	HAMAP:MF_01925	InterPro:NAD(P)-bd_dom_sf	InterPro:P5CR_dimer	InterPro:P5C_Rdtase_cat_N
PFAM:PF03807	PFAM:PF14748	PIRSF:PIRSF000193	ScanProsite:PS00521	PANTHER:PTHR11645	PANTHER:PTHR11645:SF46
MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	InterPro:Pyrroline-COOH_reductase	SUPFAM:SSF48179	SUPFAM:SSF51735
TIGRFAMs:TIGR00112	UniPathway:UPA00098	UniParc:UPI0001D62E7E	SEG:seg	:	:

Description

BnaC03g06620D

Coordinates

chrLK031791:-:1083618..1085298

Molecular Weight (calculated)

28816.7 Da

IEP (calculated)

6.406

GRAVY (calculated)

0.117

Length

276 amino acids

Sequence
(BLAST)

001: MEKHQIPMEY LTVGFIGAGK MAESIARGIV ASGVLPPHHI STAVHSNPDR HEVFQSFGVN VFSSNEEVVE ESDVVIFSVK PQVVKKAITE LRSKLTKDKL
101: LVSVAAGITL KDLQEWSGQD RFIRVMPNTP AAVGEGASVM SLGTAASEED GALVAKLFGS VGKMFKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALGL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAANRS RELSQS

Best Arabidopsis Sequence Match ( AT5G14800.1 )
(BLAST)

001: MEILPIPAES FKVGFIGAGK MAESIARGVV ASGVLPPNRI CTAVHSNLNR RDVFESFGVN VFSTSEEVVK ESDVVIFSVK PQVVKKAVTE LKSKLSKNKI
101: LVSVAAGIKL NDLQEWSGQD RFIRVMPNTP AAVGEAASVM SLGTGATEED GAIVAMLFGA VGKILKADEK MFDAVTGLSG SGPAYIFLAI EALADGGVAA
201: GLPRELALSL ASQTVLGAAT MVSKTGKHPG VLKDDVTSPG GTTIAGVHEL EKGSFRATLM NAVVAAAKRS RELSQS

Arabidopsis Description

PROC1Pyrroline-5-carboxylate reductase [Source:UniProtKB/Swiss-Prot;Acc:P54904]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.