Factsheet for Os08t0432300-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G018000.1	Wheat	cytosol	38.85	56.37
TraesCS2B01G025700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	38.51	55.88
TraesCS2D01G019300.1	Wheat	extracellular	41.22	51.69
EES13882	Sorghum	cytosol	43.92	50.58
Zm00001d032217_P001	Maize	cytosol	38.18	47.08
Zm00001d050389_P001	Maize	nucleus	40.88	44.16
Os09t0410500-00	Rice	nucleus	35.14	38.52
Os03t0706500-01	Rice	nucleus	28.04	21.39
Os01t0763200-01	Rice	cytosol	15.2	14.66
Os05t0513100-01	Rice	nucleus	13.85	13.95
Os03t0785800-01	Rice	nucleus	14.53	12.04
Os07t0152000-01	Rice	nucleus	16.22	10.79
Os01t0755500-01	Rice	cytosol, mitochondrion	14.86	9.87
Os01t0213800-01	Rice	mitochondrion	16.22	8.29
Os12t0616400-01	Rice	cytosol, nucleus, peroxisome	2.7	3.85

Protein Annotations

MapMan:15.5.19	UniProt:A0A0P0XGC2	ProteinID:BAT05566.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR017887	EnsemblPlantsGene:Os08g0432300	EnsemblPlants:Os08t0432300-00	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF68	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0003938B6F	SEG:seg	:

Description

TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 22Hypothetical conserved gene. (Os08t0432300-00)

Coordinates

chr8:+:20931199..20932112

Molecular Weight (calculated)

31405.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.601

Length

296 amino acids

Sequence
(BLAST)

001: MIPPYPNNNL HHHHHHCSSN QEPHLPLHPP AFLMSAPSSS SSPSTLDEYD ARFFFPGADA YTAGHRQDEE TLEAVLRQPV TTTAAAAAAV EGGGGGGGGG
101: AGGSPAAAAA ATRRRPFRTD RHSKIRTAQG VRDRRMRLSV GVARDFFALQ DKLGFDKASR TVEWLLTQSK HAINRLTLPD SADAAAAPAF AAAPPPADQH
201: SSAMAAAAAS AAKEKGEASS SSTTNASSAR ARNRDHDGSS PVAPMDERGR RGVELDWTAA AAASTEQPMD GLEYYFQYYN HLEEIMSCDP TTTTDE

Best Arabidopsis Sequence Match ( AT3G18550.2 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.