Factsheet for Zm00001d050389_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032217_P001	Maize	cytosol	62.77	71.67
TraesCS2B01G025700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	39.05	52.45
TraesCS2A01G018000.1	Wheat	cytosol	38.69	51.96
TraesCS2D01G019300.1	Wheat	extracellular	40.51	47.03
Zm00001d020433_P001	Maize	nucleus	40.15	43.48
Os08t0432300-00	Rice	nucleus	44.16	40.88
Zm00001d005737_P001	Maize	cytosol	37.96	37.68
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	25.55	19.13
Zm00001d013467_P001	Maize	nucleus	22.99	17.55
Zm00001d038683_P001	Maize	cytosol	17.52	16.11
Zm00001d010730_P001	Maize	cytosol, plastid	16.06	16.0
Zm00001d043368_P001	Maize	cytosol	16.42	15.9
Zm00001d022256_P001	Maize	nucleus	15.69	13.31
Zm00001d013119_P001	Maize	cytosol, nucleus, plastid	18.25	13.12
Zm00001d034353_P001	Maize	cytosol	17.88	12.69
Zm00001d007868_P001	Maize	nucleus	17.15	10.68
Zm00001d018806_P001	Maize	nucleus	16.79	10.53
Zm00001d043423_P001	Maize	nucleus	15.33	9.68
Zm00001d008919_P001	Maize	nucleus, plastid	14.96	9.65
Zm00001d039371_P001	Maize	mitochondrion	16.42	7.96
Zm00001d012725_P002	Maize	plastid	14.96	5.87

Protein Annotations

EntrezGene:100286105	MapMan:15.5.19	ProteinID:AQK52457.1	EMBL:BT063457	UniProt:C0P588	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	EMBL:KJ726896	PFAM:PF03634	PFscan:PS51369
PANTHER:PTHR31072	PANTHER:PTHR31072:SF68	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0001948F4A	EnsemblPlantsGene:Zm00001d050389
EnsemblPlants:Zm00001d050389_P001	EnsemblPlants:Zm00001d050389_T001	SEG:seg	:	:	:

Description

TCP-transcription factor 15Transcription factor TCP18

Coordinates

chr4:+:85370757..85371581

Molecular Weight (calculated)

29353.9 Da

IEP (calculated)

6.093

GRAVY (calculated)

-0.650

Length

274 amino acids

Sequence
(BLAST)

001: MPSTAAMSSS WDGYGGQIFP ADMSSFHRHQ DTLEAVFHHP PPETTTTTGL LRNDGSSPVV DDGGGHAAPR RRPFRTDRHS KIRTAQGVRD RRMRLSVGVA
101: REFFALQDRL GFDKASKTVN WLLTQSKPAI DRLVDAAAAA DDPAAVAASG GRRPTVVRGR GEGSSSSTCC CLTDSREAAE EATGNGRSRG GPDDGPPAAL
201: LEGHGGCGEL GWIMSGAPTA AVATTTTTTP QQPDGHEYYY QYCLQLEEMM RCSNDEGETT PGDFLYGMQT RDRS

Best Arabidopsis Sequence Match ( AT3G18550.2 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.