Factsheet for Zm00001d005737_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96723	Sorghum	nucleus	84.78	87.31
Zm00001d020433_P001	Maize	nucleus	76.81	83.79
Os09t0410500-00	Rice	nucleus	58.33	59.63
TraesCS5B01G205600.1	Wheat	cytosol	58.7	59.12
HORVU5Hr1G061270.1	Barley	nucleus	58.33	58.97
TraesCS5A01G207300.1	Wheat	cytosol	57.97	58.82
TraesCS5D01G213400.1	Wheat	cytosol	57.97	58.18
Zm00001d032217_P001	Maize	cytosol	34.06	39.17
Zm00001d050389_P001	Maize	nucleus	37.68	37.96
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	28.62	21.58
Zm00001d013467_P001	Maize	nucleus	26.45	20.33
Zm00001d010730_P001	Maize	cytosol, plastid	14.86	14.91
Zm00001d043368_P001	Maize	cytosol	14.49	14.13
Zm00001d034353_P001	Maize	cytosol	19.2	13.73
Zm00001d038683_P001	Maize	cytosol	14.49	13.42
Zm00001d013119_P001	Maize	cytosol, nucleus, plastid	18.48	13.39
Zm00001d022256_P001	Maize	nucleus	14.13	12.07
Zm00001d007868_P001	Maize	nucleus	17.75	11.14
Zm00001d018806_P001	Maize	nucleus	17.39	10.98
Zm00001d008919_P001	Maize	nucleus, plastid	16.67	10.82
Zm00001d043423_P001	Maize	nucleus	16.3	10.37
Zm00001d039371_P001	Maize	mitochondrion	18.12	8.85
Zm00001d012725_P002	Maize	plastid	16.67	6.59

Protein Annotations

EntrezGene:100191175	MapMan:15.5.19	UniProt:B4F7W2	EMBL:BT033200	EMBL:BT061081	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EMBL:HQ858764	InterPro:IPR017887	EMBL:JX122765	ProteinID:ONM21778.1
PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF65	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI00017B5FB0	EnsemblPlantsGene:Zm00001d005737	EnsemblPlants:Zm00001d005737_P001	EnsemblPlants:Zm00001d005737_T001	SEG:seg	:

Description

Wavy auricles in blades1 Wavy auricles in blades1

Coordinates

chr2:+:185422359..185423189

Molecular Weight (calculated)

29903.7 Da

IEP (calculated)

6.437

GRAVY (calculated)

-0.699

Length

276 amino acids

Sequence
(BLAST)

001: MLPYPNNPHH FGVSQELPHP NPTAGFPMPP PGAHLDQRYY VDHHFFPGHG HCFNSETLEA VLRPARAAPE CDEALVVTAP QAGGRRNGSL PAAAAAGQGQ
101: GQGHARARKR PFRTDRHSKI RTAQGVRDRR MRLSLDVARD FFALQDRLGF DKASKTVDWL LTQSKPAIER LAAATEPSHQ RSDDAAFSPP TSGVADVSAG
201: NKSGGVAEKL GRSRSGGSAS MEMERACGLD RLVSAAPVLR EYYYGLSEMM SNDNGGDGDD DGEYEEDGDF LDGMQY

Best Arabidopsis Sequence Match ( AT3G18550.4 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRPVLGS MDTSSDLCEL ASMWTVDDRG SNTNTTETRG NKVDGRSMRG KRKRPEPRTP ILKKLSKEER AKARERAKGR
301: TMEKMMMKMK GRSQLVKVVE EDAHDHGEII KNNNRSQVNR SSFEMTHCED KIEELCKNDR FAVCNEFIMN KKDHISNESY DLVNYKPNSS FPVINHHRSQ
401: GAANSIEQHQ FTDLHYSFGA KPRDLMHNYQ NMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.