Factsheet for HORVU5Hr1G061270.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G205600.1	Wheat	cytosol	93.41	93.07
TraesCS5D01G213400.1	Wheat	cytosol	93.04	92.36
TraesCS5A01G207300.1	Wheat	cytosol	91.94	92.28
EER96723	Sorghum	nucleus	60.44	61.57
Os09t0410500-00	Rice	nucleus	58.61	59.26
Zm00001d005737_P001	Maize	cytosol	58.97	58.33
Zm00001d020433_P001	Maize	nucleus	53.11	57.31
HORVU5Hr1G000490.1	Barley	nucleus	24.54	22.56
HORVU4Hr1G007040.1	Barley	nucleus	29.3	22.41
HORVU3Hr1G073830.1	Barley	nucleus	14.29	14.03
HORVU5Hr1G008340.2	Barley	nucleus	14.65	13.56
HORVU1Hr1G077080.1	Barley	nucleus	13.19	12.33
HORVU5Hr1G103400.1	Barley	nucleus	16.12	11.0
HORVU2Hr1G060120.1	Barley	nucleus	16.48	10.92
HORVU3Hr1G028240.5	Barley	extracellular, golgi, mitochondrion	18.68	8.64
HORVU0Hr1G006890.2	Barley	cytosol	3.66	4.65
HORVU3Hr1G072670.2	Barley	nucleus	3.66	4.27

Protein Annotations

MapMan:15.5.19	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G061270	EnsemblPlants:HORVU5Hr1G061270.1
InterPro:IPR017887	UniProt:M0WA64	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF65
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000295CCE3	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:479581181..479582615

Molecular Weight (calculated)

30010.1 Da

IEP (calculated)

6.439

GRAVY (calculated)

-0.772

Length

273 amino acids

Sequence
(BLAST)

001: MLPYHPNPHG FWISREPPAQ TPNPASSFSM APPAHQDHQI QHYDHFFPGH GNQFNSETLE AVLRPRPPAP PLADMPPGNG PRTGAVQAAG AGHARARKRP
101: FRTDRHSKIR TAQGVRDRRM RLSLDVARDF FALQDQLGFD KASKTVDWLL TQSKPAIDRL SESSRLHVAG AGEDGMSSLS SVEREGRRLK ETELAAGSGK
201: GAVDVEKAMR ARGGGTSVPM EHRREMNSGL MSASMTGGEY YYDLGEMMCI NAGECDDDGE YDEDGDFLDG MQY

Best Arabidopsis Sequence Match ( AT3G18550.2 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.