Factsheet for HORVU3Hr1G073830.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G298900.1	Wheat	nucleus	97.12	98.18
TraesCS3A01G302900.1	Wheat	nucleus	97.48	97.48
TraesCS3B01G333400.1	Wheat	nucleus	96.76	96.07
Os01t0763200-01	Rice	cytosol	73.74	66.78
Zm00001d043368_P001	Maize	cytosol	66.91	65.72
EES03657	Sorghum	nucleus	66.19	63.67
HORVU1Hr1G077080.1	Barley	nucleus	52.16	49.66
Solyc02g065800.1.1	Tomato	cytosol, plastid	23.74	46.48
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	27.7	35.32
PGSC0003DMT400003453	Potato	nucleus, plastid	32.37	31.8
Solyc02g089020.1.1	Tomato	nucleus, plastid	31.3	30.63
VIT_14s0068g00330.t01	Wine grape	nucleus	35.97	28.65
KRH45058	Soybean	nucleus	35.97	28.17
KRG93654	Soybean	nucleus	35.61	26.47
CDX91977	Canola	nucleus	29.86	25.94
CDX74272	Canola	nucleus	29.86	25.94
KRH01308	Soybean	cytosol	34.89	25.26
Bra039158.1-P	Field mustard	nucleus	27.7	24.92
AT3G02150.2	Thale cress	nucleus	29.14	22.82
HORVU5Hr1G008340.2	Barley	nucleus	21.58	20.34
CDY60475	Canola	endoplasmic reticulum, golgi	28.06	19.65
HORVU2Hr1G060120.1	Barley	nucleus	28.06	18.93
CDY43255	Canola	endoplasmic reticulum, golgi	27.7	17.95
HORVU5Hr1G103400.1	Barley	nucleus	24.82	17.25
Bra001032.1-P	Field mustard	nucleus	29.14	15.06
HORVU5Hr1G061270.1	Barley	nucleus	14.03	14.29
HORVU5Hr1G000490.1	Barley	nucleus	14.39	13.47
HORVU3Hr1G028240.5	Barley	extracellular, golgi, mitochondrion	23.38	11.02
HORVU4Hr1G007040.1	Barley	nucleus	13.31	10.36
HORVU3Hr1G072670.2	Barley	nucleus	5.04	5.98
HORVU0Hr1G006890.2	Barley	cytosol	3.96	5.12

Protein Annotations

MapMan:15.5.19	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G073830
EnsemblPlants:HORVU3Hr1G073830.1	InterPro:IPR017887	UniProt:M0UVT2	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF67	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000294A241	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:555807762..555810453

Molecular Weight (calculated)

30106.2 Da

IEP (calculated)

7.983

GRAVY (calculated)

-0.468

Length

278 amino acids

Sequence
(BLAST)

001: MMSSNNQQQQ SAAAAAEEEQ ELARKHAAAV ATSRQWSSQT ESRIVRVSRV FGGKDRHSKV KTVKGLRDRR VRLSVQTAIQ LYDLQDRLGL NQPSKVVDWL
101: LNAARHEIDK LPPLQFPPHQ VDLMDHMMTS SSMPLMPHVD DKFCHFASTL AGDGVKAGAD ADGGGAHHNM GRFGYHRFMG LNNNSLGLVN SGMPYNFTGE
201: SWNNSSVHQS GGAGSAQVSI AAAAAAHHSA FPSLLSLAPR SHQLVYYSSD ADQFPVDDLG SQSLSLSSAR GFHDQTGS

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.