Factsheet for Os01t0763200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G333400.1	Wheat	nucleus	68.73	75.36
TraesCS3A01G302900.1	Wheat	nucleus	67.75	74.82
TraesCS3D01G298900.1	Wheat	nucleus	66.78	74.55
Zm00001d043368_P001	Maize	cytosol	68.08	73.85
HORVU3Hr1G073830.1	Barley	nucleus	66.78	73.74
EES03657	Sorghum	nucleus	66.45	70.59
Os05t0513100-01	Rice	nucleus	51.47	53.74
Solyc02g065800.1.1	Tomato	cytosol, plastid	22.15	47.89
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	25.08	35.32
PGSC0003DMT400003453	Potato	nucleus, plastid	29.97	32.51
Solyc02g089020.1.1	Tomato	nucleus, plastid	29.64	32.04
VIT_14s0068g00330.t01	Wine grape	nucleus	34.85	30.66
KRH45058	Soybean	nucleus	34.2	29.58
KRG93654	Soybean	nucleus	34.2	28.07
KRH01308	Soybean	cytosol	34.85	27.86
Bra039158.1-P	Field mustard	nucleus	27.04	26.86
CDX91977	Canola	nucleus	27.69	26.56
CDX74272	Canola	nucleus	27.69	26.56
AT3G02150.2	Thale cress	nucleus	27.69	23.94
CDY60475	Canola	endoplasmic reticulum, golgi	27.36	21.16
Os03t0785800-01	Rice	nucleus	24.1	20.73
CDY43255	Canola	endoplasmic reticulum, golgi	27.04	19.35
Os07t0152000-01	Rice	nucleus	25.08	17.3
Os09t0410500-00	Rice	nucleus	14.01	15.93
Bra001032.1-P	Field mustard	nucleus	27.04	15.43
Os08t0432300-00	Rice	nucleus	14.66	15.2
Os01t0755500-01	Rice	cytosol, mitochondrion	19.54	13.45
Os01t0213800-01	Rice	mitochondrion	21.82	11.57
Os03t0706500-01	Rice	nucleus	14.01	11.08
Os12t0616400-01	Rice	cytosol, nucleus, peroxisome	2.93	4.33

Protein Annotations

MapMan:15.5.19	EntrezGene:4327032	ProteinID:BAB92377.1	ProteinID:BAF06247.1	ProteinID:BAS74474.1	ncoils:Coil
EMBL:EU152205	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	EnsemblPlantsGene:Os01g0763200
EnsemblPlants:Os01t0763200-01	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF67	UniProt:Q8LR43
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI00000A9C2A	RefSeq:XP_015626531.1	RefSeq:XP_015626542.1	SEG:seg

Description

TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 5, TEOSINTE BRANCHED1/CYCLOIDEA/PCFs 5TCP family transcription factor, Strigolactone and cytokinin controlled mesocotyl elongation in darkness (Os01t0763200-01)

Coordinates

chr1:-:32106876..32109742

Molecular Weight (calculated)

32006.4 Da

IEP (calculated)

7.327

GRAVY (calculated)

-0.321

Length

307 amino acids

Sequence
(BLAST)

001: MILGSNQAAA AAAAAAAAEE EAAELARKHT AAVATSRQWS AQTESRIVRV SRVFGGKDRH SKVKTVKGLR DRRVRLSVPT AIQLYDLQDR LGLNQPSKVV
101: DWLLNAARHE IDKLPPLQFP PQDHLCMGHH HHLPSAMPLM HHHGHHHHAD DDKYHVAAAA AALAAEKEAA AAGGGGGGGG DDVDGGGGGG AAHIVGRFPA
201: GGYHRFMGLN NPLGMVNSAA GAAMPFHYAG ESWNNGSVQD SGAGSPQVAA AAAHHTSPFP SLLSLAPGPH HQLVFYSSEA EQFTVDNLGS QGLSLSSARA
301: FHDQTGS

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.