Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45058 | Soybean | nucleus | 59.89 | 63.1 |
| KRH01308 | Soybean | cytosol | 62.3 | 60.68 |
| VIT_14s0068g00330.t01 | Wine grape | nucleus | 46.52 | 49.86 |
| PGSC0003DMT400003453 | Potato | nucleus, plastid | 33.42 | 44.17 |
| Solyc02g089020.1.1 | Tomato | nucleus, plastid | 32.62 | 42.96 |
| Bra039158.1-P | Field mustard | nucleus | 33.69 | 40.78 |
| CDX74272 | Canola | nucleus | 34.76 | 40.62 |
| CDX91977 | Canola | nucleus | 34.76 | 40.62 |
| AT3G02150.2 | Thale cress | nucleus | 35.83 | 37.75 |
| EES18493 | Sorghum | cytosol | 29.41 | 36.91 |
| Zm00001d010730_P001 | Maize | cytosol, plastid | 27.01 | 36.73 |
| Zm00001d043368_P001 | Maize | cytosol | 27.01 | 35.69 |
| EES03657 | Sorghum | nucleus | 27.54 | 35.64 |
| TraesCS3D01G298900.1 | Wheat | nucleus | 26.2 | 35.64 |
| HORVU3Hr1G073830.1 | Barley | nucleus | 26.47 | 35.61 |
| TraesCS3A01G302900.1 | Wheat | nucleus | 26.47 | 35.61 |
| Zm00001d038683_P001 | Maize | cytosol | 28.34 | 35.57 |
| Os05t0513100-01 | Rice | nucleus | 27.81 | 35.37 |
| TraesCS3B01G333400.1 | Wheat | nucleus | 26.47 | 35.36 |
| Os01t0763200-01 | Rice | cytosol | 28.07 | 34.2 |
| HORVU1Hr1G077080.1 | Barley | nucleus | 26.2 | 33.56 |
| KRH54711 | Soybean | plastid | 34.76 | 33.33 |
| KRH03150 | Soybean | nucleus, plastid | 33.96 | 32.65 |
| KRH63215 | Soybean | nucleus, plastid | 33.69 | 32.56 |
| TraesCS1A01G332600.1 | Wheat | nucleus | 26.47 | 32.35 |
| TraesCS1B01G346300.1 | Wheat | nucleus | 26.2 | 31.82 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 33.69 | 31.74 |
| TraesCS1D01G335300.1 | Wheat | nucleus | 26.47 | 31.63 |
| KRH56798 | Soybean | nucleus | 32.62 | 31.2 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 33.96 | 29.6 |
| Bra001032.1-P | Field mustard | nucleus | 34.76 | 24.16 |
| KRH25697 | Soybean | nucleus | 16.04 | 20.62 |
| KRH27017 | Soybean | nucleus | 17.91 | 19.53 |
| KRH22307 | Soybean | nucleus | 17.91 | 19.48 |
| KRH55125 | Soybean | nucleus | 19.79 | 18.93 |
| KRH27317 | Soybean | nucleus | 18.98 | 18.83 |
| KRH21998 | Soybean | nucleus | 19.79 | 18.83 |
| KRH26201 | Soybean | nucleus | 19.79 | 18.64 |
| KRH58674 | Soybean | nucleus | 23.53 | 18.41 |
| KRH55819 | Soybean | nucleus | 16.04 | 18.02 |
| KRH42567 | Soybean | nucleus | 22.46 | 17.95 |
| KRH11155 | Soybean | nucleus | 23.26 | 17.03 |
| KRH21093 | Soybean | nucleus | 23.26 | 16.35 |
| KRH56692 | Soybean | nucleus | 14.17 | 14.1 |
| KRH45185 | Soybean | plastid | 13.9 | 14.05 |
| KRH01497 | Soybean | plastid | 13.9 | 14.05 |
| KRH63057 | Soybean | nucleus | 14.44 | 14.03 |
| KRH03810 | Soybean | nucleus | 13.9 | 13.68 |
| KRH54810 | Soybean | nucleus | 14.17 | 13.38 |
| KRH18263 | Soybean | plastid | 13.64 | 12.17 |
| KRG93829 | Soybean | nucleus, plastid | 13.37 | 12.02 |
| KRG91334 | Soybean | nucleus | 11.23 | 11.2 |
| KRH35497 | Soybean | nucleus | 10.7 | 10.53 |
Protein Annotations
| EntrezGene:100803100 | MapMan:15.5.19 | EMBL:ACUP02011605 | EnsemblPlantsGene:GLYMA_19G0309001 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR017887 | UniProt:K7MW90 | EnsemblPlants:KRG93654 | ProteinID:KRG93654 | ProteinID:KRG93654.1 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF5 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI0001B36B59 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:3831033..3832827
Molecular Weight (calculated)
41360.2 Da
IEP (calculated)
8.079
GRAVY (calculated)
-0.742
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MINSTKETDF PLKQEGLSSS DHEKAKAPSS SSSSQWLKLK DPRIVRVSRA FGGKDRHSKV CTIRGLRDRR VRLSVPTAIH LYDLQDRLGL NQPSKVVDWL
101: LNAAKHEIDE LPPLPIPPGN FTLGYPSLVS CNEVSTSREG SGQNTLLWKP KPGEIMVSDH DKANWMNRRE GDDDDDNNHN NSNGDKQGSN NNCHGGALVL
201: PNNLLPTRPN HPSFLGLMNT MPSLGYQWEP NSSAADVNVQ WQNHGFFNQT DVHSIDVVPF PSTLALSTGN STSTTTTSQI LVCPPPPGAT TQPYFPSSHF
301: ATMEMNARQI NHYQMLSSSS HQNLLANSLN HPSSQQLMSQ SGKAPFSLRI RPKLFHSPNS SESHSQKDQD FPSK
101: LNAAKHEIDE LPPLPIPPGN FTLGYPSLVS CNEVSTSREG SGQNTLLWKP KPGEIMVSDH DKANWMNRRE GDDDDDNNHN NSNGDKQGSN NNCHGGALVL
201: PNNLLPTRPN HPSFLGLMNT MPSLGYQWEP NSSAADVNVQ WQNHGFFNQT DVHSIDVVPF PSTLALSTGN STSTTTTSQI LVCPPPPGAT TQPYFPSSHF
301: ATMEMNARQI NHYQMLSSSS HQNLLANSLN HPSSQQLMSQ SGKAPFSLRI RPKLFHSPNS SESHSQKDQD FPSK
001: MNIVSWKDAN DEVAGGATTR REREVKEDQE ETEVRATSGK TVIKKQPTSI SSSSSSWMKS KDPRIVRVSR AFGGKDRHSK VCTLRGLRDR RVRLSVPTAI
101: QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH
201: VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST
301: LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG SDHHM
101: QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH
201: VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST
301: LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG SDHHM
Arabidopsis Description
TCP13Transcription factor TCP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7W5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.