CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01497	Soybean	plastid	94.05	94.05
KRH18263	Soybean	plastid	66.49	58.71
KRG93829	Soybean	nucleus, plastid	65.68	58.41
KRG91334	Soybean	nucleus	46.22	45.6
KRH35497	Soybean	nucleus	45.68	44.47
VIT_14s0083g00150.t01	Wine grape	nucleus	35.68	40.0
PGSC0003DMT400026037	Potato	cytosol, nucleus, plastid	21.35	33.19
Solyc02g089830.1.1	Tomato	cytosol, nucleus, plastid	20.81	31.95
PGSC0003DMT400008673	Potato	nucleus	13.51	31.85
Solyc03g045030.1.1	Tomato	nucleus	14.59	29.51
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	25.14	28.18
CDY07432	Canola	nucleus	22.7	23.86
CDX96104	Canola	nucleus	22.43	23.65
Bra004097.1-P	Field mustard	nucleus	22.16	23.63
TraesCS5D01G002300.1	Wheat	nucleus	16.76	23.48
Bra004212.1-P	Field mustard	nucleus	21.62	23.46
KRH56692	Soybean	nucleus	23.78	23.4
CDY01793	Canola	nucleus	22.16	23.23
CDY28898	Canola	nucleus	22.16	23.16
KRH03810	Soybean	nucleus	23.78	23.16
TraesCS5A01G001900.1	Wheat	nucleus	17.03	23.08
CDY12633	Canola	nucleus	20.0	22.98
HORVU4Hr1G007040.1	Barley	nucleus	22.16	22.97
TraesCS4D01G040100.1	Wheat	nucleus	21.62	22.73
TraesCS4A01G271300.1	Wheat	nucleus	21.35	22.44
TraesCS4B01G042700.1	Wheat	nucleus	21.35	22.32
AT1G67260.1	Thale cress	nucleus	21.62	22.28
Bra034010.1-P	Field mustard	nucleus	20.81	22.25
KRH54810	Soybean	nucleus	23.78	22.22
TraesCS5B01G002300.1	Wheat	nucleus	17.57	22.03
CDY46042	Canola	nucleus	20.54	21.97
KRH63057	Soybean	nucleus	22.43	21.56
HORVU5Hr1G000490.1	Barley	nucleus	17.3	21.55
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	19.46	19.67
EER93595	Sorghum	cytosol, nucleus, peroxisome, plastid	19.46	18.95
Os03t0706500-01	Rice	nucleus	19.73	18.81
Zm00001d013467_P001	Maize	nucleus	17.84	18.38
KRH63215	Soybean	nucleus, plastid	14.86	14.21
KRH27017	Soybean	nucleus	12.97	13.99
KRH22307	Soybean	nucleus	12.97	13.95
KRG93654	Soybean	nucleus	14.05	13.9
KRH54711	Soybean	plastid	14.59	13.85
KRH45058	Soybean	nucleus	13.24	13.8
KRH01308	Soybean	cytosol	13.78	13.28
KRH25697	Soybean	nucleus	10.27	13.06
KRH26201	Soybean	nucleus	13.78	12.85
KRH27317	Soybean	nucleus	12.97	12.73
KRH58674	Soybean	nucleus	16.22	12.55
KRH42567	Soybean	nucleus	15.68	12.39
KRH55125	Soybean	nucleus	12.97	12.28
KRH11155	Soybean	nucleus	16.76	12.13
KRH21998	Soybean	nucleus	12.7	11.96
KRH55819	Soybean	nucleus	10.54	11.71
KRH21093	Soybean	nucleus	16.76	11.65
KRH56798	Soybean	nucleus	12.16	11.51
KRH03150	Soybean	nucleus, plastid	11.89	11.31

Protein Annotations

EntrezGene:100792572	MapMan:15.5.19	EMBL:ACUP02005007	InterPro:CYC/TB1_R_domain	EnsemblPlantsGene:GLYMA_08G256400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	InterPro:IPR017888	UniProt:K7L8W0	EnsemblPlants:KRH45185
ProteinID:KRH45185	ProteinID:KRH45185.1	PFAM:PF03634	PFscan:PS51369	PFscan:PS51370	PANTHER:PTHR31072
PANTHER:PTHR31072:SF18	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0002337C52	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:22922232..22924139

Molecular Weight (calculated)

41201.3 Da

IEP (calculated)

8.823

GRAVY (calculated)

-0.676

Length

370 amino acids

Sequence
(BLAST)

001: MFPSTNYTSS GSYPRFPSSS SSSTSPYPSF TLLHPENSSS SNTFLCDPLA LTYIPSHYHA PIIPETLANW AVADCAILNQ DLGGALYGIT NKPEKKATKK
101: DRHSKIHTSQ GLRDRRVRLS IEIARKFFDL QDMLGFDKAS NTLDWLFTKS KKAIKELTRS KHSADSFEFS SSSDGEVVST IHQDLHQQQG VDLEEGKLKE
201: PAAYCVKAKM KESREKARAR ARQRTSSKVL CNISSEGKVQ DLKKKCPATE NPQILNQLRS PLQPPHPQDV GGEVPRDDDF NVIEESIVIR RKLKHTLMSS
301: IHHQNAVIPK EASVNNSDYH SFPNLSPNWE ANNNGANGRS TFCAIASMNL STGLQIFGKS WEECTNPHPS

Best Arabidopsis Sequence Match ( AT1G67260.3 )
(BLAST)

001: MSSSTNDYND GNNNGVYPLS LYLSSLSGHQ DIIHNPYNHQ LKASPGHMVS AVPESLIDYM AFKSNNVVNQ QGFEFPEVSK EIKKVVKKDR HSKIQTAQGI
101: RDRRVRLSIG IARQFFDLQD MLGFDKASKT LDWLLKKSRK AIKEVVQAKN LNNDDEDFGN IGGDVEQEEE KEEDDNGDKS FVYGLSPGYG EEEVVCEATK
201: AGIRKKKSEL RNISSKGLGA KARGKAKERT KEMMAYDNPE TASDITQSEI MDPFKRSIVF NEGEDMTHLF YKEPIEEFDN QESILTNMTL PTKMGQSYNQ
301: NNGILMLVDQ SSSSNYNTFL PQNLDYSYDQ NPFHDQTLYV VTDKNFPKGF L

Arabidopsis Description

TCP1Transcription factor TCP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.