Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27317 | Soybean | nucleus | 84.22 | 87.8 |
| VIT_19s0014g01680.t01 | Wine grape | nucleus | 51.91 | 51.26 |
| KRH55125 | Soybean | nucleus | 50.64 | 50.9 |
| KRH26201 | Soybean | nucleus | 50.89 | 50.38 |
| KRH22307 | Soybean | nucleus | 40.2 | 45.93 |
| KRH27017 | Soybean | nucleus | 39.19 | 44.9 |
| KRH25697 | Soybean | nucleus | 33.08 | 44.67 |
| TraesCS3B01G164500.1 | Wheat | nucleus | 45.55 | 39.78 |
| TraesCS3D01G146900.1 | Wheat | nucleus | 45.55 | 39.43 |
| KRH55819 | Soybean | nucleus | 33.33 | 39.34 |
| TraesCS3A01G140100.1 | Wheat | nucleus | 45.29 | 38.95 |
| Zm00001d008919_P001 | Maize | nucleus, plastid | 39.95 | 36.94 |
| Os01t0213800-01 | Rice | mitochondrion | 46.56 | 31.61 |
| HORVU3Hr1G028240.5 | Barley | extracellular, golgi, mitochondrion | 46.06 | 30.68 |
| Zm00001d039371_P001 | Maize | mitochondrion | 43.77 | 30.44 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 33.33 | 29.37 |
| KXG33398 | Sorghum | nucleus | 33.59 | 29.27 |
| Zm00001d043423_P001 | Maize | nucleus | 31.81 | 28.8 |
| OQU86111 | Sorghum | plastid | 44.02 | 27.59 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 11.45 | 20.93 |
| KRG93654 | Soybean | nucleus | 18.83 | 19.79 |
| KRH54711 | Soybean | plastid | 19.59 | 19.74 |
| KRH45058 | Soybean | nucleus | 17.81 | 19.72 |
| KRH63215 | Soybean | nucleus, plastid | 19.08 | 19.38 |
| Zm00001d012725_P002 | Maize | plastid | 33.08 | 18.62 |
| KRH58674 | Soybean | nucleus | 22.39 | 18.41 |
| KRH42567 | Soybean | nucleus | 21.88 | 18.38 |
| KRH03150 | Soybean | nucleus, plastid | 17.56 | 17.74 |
| KRH56798 | Soybean | nucleus | 17.56 | 17.65 |
| KRH11155 | Soybean | nucleus | 22.65 | 17.42 |
| KRH01308 | Soybean | cytosol | 16.79 | 17.19 |
| KRH21093 | Soybean | nucleus | 22.65 | 16.73 |
| KRH03810 | Soybean | nucleus | 14.5 | 15.0 |
| KRH56692 | Soybean | nucleus | 14.25 | 14.89 |
| KRH63057 | Soybean | nucleus | 12.98 | 13.25 |
| KRH01497 | Soybean | plastid | 12.21 | 12.97 |
| KRH45185 | Soybean | plastid | 11.96 | 12.7 |
| KRH54810 | Soybean | nucleus | 12.72 | 12.63 |
| KRG91334 | Soybean | nucleus | 11.7 | 12.27 |
| KRH35497 | Soybean | nucleus | 11.45 | 11.84 |
| KRG93829 | Soybean | nucleus, plastid | 11.96 | 11.3 |
| KRH18263 | Soybean | plastid | 11.96 | 11.22 |
Protein Annotations
| EntrezGene:100796938 | MapMan:15.5.19 | UniProt:A0A0R0GUP4 | EMBL:ACUP02008374 | EnsemblPlantsGene:GLYMA_13G271700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | EnsemblPlants:KRH21998 | ProteinID:KRH21998 | ProteinID:KRH21998.1 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF13 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI000233B92C | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:37375211..37377285
Molecular Weight (calculated)
41779.6 Da
IEP (calculated)
7.230
GRAVY (calculated)
-0.767
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGSGGEIV QVEGGHIVRS TGRKDRHSKV CTAKGPRDRR VRLSAHTAIQ FYDVQDRLGY DRPSKAVDWL INKAKSSIDQ LAHLPPWKPT LPSPAPPHLN
101: DDHSDKPNPN PNPNPNPNPN PNHSPDAQIL NQFDHDDGAG AGSSYLPMDN DAIRSFFPTT TSSLVQFQSY PPDLLSRTSS QDLRLSLQSL QDPILLHHNH
201: NNNEHVLFAG TAFDNMVAWN NNSNNNHNNN NHNNNNNNNN NNNTASNDTC GGGGGGGGGG GGGGGGFVFN APSTLPGPAT VASPTVVFGH GYGQGQYFSQ
301: RGPLQSSNSP SVRAWIDAPS FVAAAADHRH HHYLSPAAAA AALVYQSAPP TAAFTAAPGG FSGFRVPARI QGEEEHDGGM SDKPSSASSD SRR
101: DDHSDKPNPN PNPNPNPNPN PNHSPDAQIL NQFDHDDGAG AGSSYLPMDN DAIRSFFPTT TSSLVQFQSY PPDLLSRTSS QDLRLSLQSL QDPILLHHNH
201: NNNEHVLFAG TAFDNMVAWN NNSNNNHNNN NHNNNNNNNN NNNTASNDTC GGGGGGGGGG GGGGGGFVFN APSTLPGPAT VASPTVVFGH GYGQGQYFSQ
301: RGPLQSSNSP SVRAWIDAPS FVAAAADHRH HHYLSPAAAA AALVYQSAPP TAAFTAAPGG FSGFRVPARI QGEEEHDGGM SDKPSSASSD SRR
001: MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
Arabidopsis Description
TCP3TCP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.