Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35497 | Soybean | nucleus | 83.73 | 82.63 |
| KRH45185 | Soybean | plastid | 45.6 | 46.22 |
| KRH01497 | Soybean | plastid | 45.07 | 45.68 |
| KRH18263 | Soybean | plastid | 47.73 | 42.72 |
| KRG93829 | Soybean | nucleus, plastid | 46.93 | 42.31 |
| VIT_14s0083g00150.t01 | Wine grape | nucleus | 29.87 | 33.94 |
| PGSC0003DMT400026037 | Potato | cytosol, nucleus, plastid | 20.27 | 31.93 |
| Solyc02g089830.1.1 | Tomato | cytosol, nucleus, plastid | 19.73 | 30.71 |
| PGSC0003DMT400008673 | Potato | nucleus | 12.8 | 30.57 |
| Solyc03g045030.1.1 | Tomato | nucleus | 13.6 | 27.87 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 22.4 | 25.45 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 16.0 | 21.98 |
| KRH03810 | Soybean | nucleus | 22.13 | 21.84 |
| KRH63057 | Soybean | nucleus | 22.4 | 21.82 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 15.2 | 21.59 |
| KRH56692 | Soybean | nucleus | 21.33 | 21.28 |
| CDY12633 | Canola | nucleus | 18.13 | 21.12 |
| Bra004212.1-P | Field mustard | nucleus | 19.2 | 21.11 |
| Bra004097.1-P | Field mustard | nucleus | 19.47 | 21.04 |
| CDY07432 | Canola | nucleus | 19.73 | 21.02 |
| CDY01793 | Canola | nucleus | 19.73 | 20.96 |
| KRH54810 | Soybean | nucleus | 22.13 | 20.96 |
| CDY28898 | Canola | nucleus | 19.73 | 20.9 |
| AT1G67260.1 | Thale cress | nucleus | 19.73 | 20.61 |
| Bra034010.1-P | Field mustard | nucleus | 18.67 | 20.23 |
| CDX96104 | Canola | nucleus | 18.93 | 20.23 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 15.73 | 20.0 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 18.67 | 19.89 |
| CDY46042 | Canola | nucleus | 18.13 | 19.65 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 18.4 | 19.6 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 18.4 | 19.49 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 18.4 | 19.33 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 14.93 | 18.86 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 18.13 | 17.89 |
| Os03t0706500-01 | Rice | nucleus | 17.87 | 17.27 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 16.8 | 17.21 |
| Zm00001d013467_P001 | Maize | nucleus | 16.0 | 16.71 |
| KRH22307 | Soybean | nucleus | 12.0 | 13.08 |
| KRH27017 | Soybean | nucleus | 11.73 | 12.83 |
| KRH25697 | Soybean | nucleus | 9.87 | 12.71 |
| KRH45058 | Soybean | nucleus | 12.0 | 12.68 |
| KRH01308 | Soybean | cytosol | 12.53 | 12.24 |
| KRH27317 | Soybean | nucleus | 12.0 | 11.94 |
| KRH55125 | Soybean | nucleus | 12.27 | 11.76 |
| KRH21998 | Soybean | nucleus | 12.27 | 11.7 |
| KRH26201 | Soybean | nucleus | 12.27 | 11.59 |
| KRG93654 | Soybean | nucleus | 11.2 | 11.23 |
| KRH55819 | Soybean | nucleus | 9.87 | 11.11 |
| KRH42567 | Soybean | nucleus | 13.87 | 11.11 |
| KRH58674 | Soybean | nucleus | 14.13 | 11.09 |
| KRH11155 | Soybean | nucleus | 14.4 | 10.57 |
| KRH21093 | Soybean | nucleus | 14.93 | 10.53 |
| KRH63215 | Soybean | nucleus, plastid | 10.67 | 10.34 |
| KRH54711 | Soybean | plastid | 10.67 | 10.26 |
| KRH56798 | Soybean | nucleus | 10.4 | 9.97 |
| KRH03150 | Soybean | nucleus, plastid | 10.13 | 9.77 |
Protein Annotations
| MapMan:15.5.19 | EMBL:ACUP02012677 | InterPro:CYC/TB1_R_domain | EnsemblPlantsGene:GLYMA_20G148500 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | UniProt:I1NGH4 | InterPro:IPR017887 | InterPro:IPR017888 | EnsemblPlants:KRG91334 | ProteinID:KRG91334 |
| ProteinID:KRG91334.1 | PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF18 |
| InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI00023DC389 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:+:38691991..38693118
Molecular Weight (calculated)
42490.5 Da
IEP (calculated)
8.136
GRAVY (calculated)
-0.757
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSTYDSSN LFPNFPSSSY PILPFLIDPE NDFASHTLLD DHPLVVPAGL IHDPPLLPEE TVANFAVAAD CTAAMLEHDA ANTNYGSHYG SSVSNFLTQK
101: PAAATAKKDR HSKIHTSQGL RDRRVRLSSE IARKFFDLQD MLEFDKPSNT FDWLFTKSEN AIKELARSKH SGSVSRGDIK YSRYPSVDSN NNNKSLVDGG
201: DASRGRKLKW AQRDDVCVQN KKESRERARA RARERTCYKM CSCSRRVQQK DSDERFPATT NTQMLHQLRS SIQPELEDQP RARWVQPYYN NPYFIDNEAP
301: RNGFNVIEES IMIKRNMKPS SHQNLVIPRD ASFNNNEFPL LPYSSTTPNW DSTNGAVNFG GISTMNLSTC FMNPW
101: PAAATAKKDR HSKIHTSQGL RDRRVRLSSE IARKFFDLQD MLEFDKPSNT FDWLFTKSEN AIKELARSKH SGSVSRGDIK YSRYPSVDSN NNNKSLVDGG
201: DASRGRKLKW AQRDDVCVQN KKESRERARA RARERTCYKM CSCSRRVQQK DSDERFPATT NTQMLHQLRS SIQPELEDQP RARWVQPYYN NPYFIDNEAP
301: RNGFNVIEES IMIKRNMKPS SHQNLVIPRD ASFNNNEFPL LPYSSTTPNW DSTNGAVNFG GISTMNLSTC FMNPW
001: MSSSTNDYND GNNNGVYPLS LYLSSLSGHQ DIIHNPYNHQ LKASPGHMVS AVPESLIDYM AFKSNNVVNQ QGFEFPEVSK EIKKVVKKDR HSKIQTAQGI
101: RDRRVRLSIG IARQFFDLQD MLGFDKASKT LDWLLKKSRK AIKEVVQAKN LNNDDEDFGN IGGDVEQEEE KEEDDNGDKS FVYGLSPGYG EEEVVCEATK
201: AGIRKKKSEL RNISSKGLGA KARGKAKERT KEMMAYDNPE TASDITQSEI MDPFKRSIVF NEGEDMTHLF YKEPIEEFDN QESILTNMTL PTKMGQSYNQ
301: NNGILMLVDQ SSSSNYNTFL PQNLDYSYDQ NPFHDQTLYV VTDKNFPKGF L
101: RDRRVRLSIG IARQFFDLQD MLGFDKASKT LDWLLKKSRK AIKEVVQAKN LNNDDEDFGN IGGDVEQEEE KEEDDNGDKS FVYGLSPGYG EEEVVCEATK
201: AGIRKKKSEL RNISSKGLGA KARGKAKERT KEMMAYDNPE TASDITQSEI MDPFKRSIVF NEGEDMTHLF YKEPIEEFDN QESILTNMTL PTKMGQSYNQ
301: NNGILMLVDQ SSSSNYNTFL PQNLDYSYDQ NPFHDQTLYV VTDKNFPKGF L
Arabidopsis Description
TCP1Transcription factor TCP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.