Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008673 | Potato | nucleus | 72.13 | 84.08 |
| Solyc02g089830.1.1 | Tomato | cytosol, nucleus, plastid | 43.17 | 32.78 |
| Solyc02g065800.1.1 | Tomato | cytosol, plastid | 16.39 | 21.13 |
| Solyc10g018710.1.1 | Tomato | nucleus | 16.39 | 17.54 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 28.96 | 16.06 |
| Solyc05g009900.1.1 | Tomato | nucleus | 30.6 | 15.86 |
| Solyc04g006980.1.1 | Tomato | nucleus | 30.6 | 14.93 |
| CDY12633 | Canola | nucleus | 26.23 | 14.91 |
| KRH45185 | Soybean | plastid | 29.51 | 14.59 |
| KRH01497 | Soybean | plastid | 29.51 | 14.59 |
| VIT_14s0083g00150.t01 | Wine grape | nucleus | 26.23 | 14.55 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 20.77 | 14.39 |
| Bra004212.1-P | Field mustard | nucleus | 26.78 | 14.37 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 21.31 | 14.29 |
| Solyc03g119770.2.1 | Tomato | nucleus | 26.78 | 14.16 |
| CDX96104 | Canola | nucleus | 26.78 | 13.96 |
| CDY07432 | Canola | nucleus | 26.78 | 13.92 |
| CDY01793 | Canola | nucleus | 26.78 | 13.88 |
| CDY46042 | Canola | nucleus | 26.23 | 13.87 |
| Bra034010.1-P | Field mustard | nucleus | 26.23 | 13.87 |
| CDY28898 | Canola | nucleus | 26.78 | 13.84 |
| KRG93829 | Soybean | nucleus, plastid | 31.15 | 13.7 |
| KRH18263 | Soybean | plastid | 31.15 | 13.6 |
| KRG91334 | Soybean | nucleus | 27.87 | 13.6 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 21.86 | 13.56 |
| Bra004097.1-P | Field mustard | nucleus | 25.68 | 13.54 |
| Solyc05g012840.1.1 | Tomato | nucleus | 16.39 | 13.45 |
| AT1G67260.1 | Thale cress | nucleus | 26.23 | 13.37 |
| Solyc06g069240.1.1 | Tomato | nucleus | 29.51 | 13.3 |
| Solyc11g045640.1.1 | Tomato | nucleus | 15.85 | 13.24 |
| KRH35497 | Soybean | nucleus | 27.32 | 13.16 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 21.31 | 13.13 |
| Solyc05g032780.1.1 | Tomato | nucleus | 14.75 | 12.74 |
| Solyc07g053410.2.1 | Tomato | cytosol | 16.94 | 12.7 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 24.04 | 12.32 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 23.5 | 12.22 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 23.5 | 12.22 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 23.5 | 12.15 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 25.14 | 12.11 |
| Os03t0706500-01 | Rice | nucleus | 24.59 | 11.6 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 22.95 | 11.48 |
| Zm00001d013467_P001 | Maize | nucleus | 21.31 | 10.86 |
| Solyc06g069460.1.1 | Tomato | plastid | 16.39 | 10.79 |
| Solyc02g089020.1.1 | Tomato | nucleus, plastid | 15.3 | 9.86 |
| Solyc08g048370.2.1 | Tomato | cytosol | 17.49 | 9.82 |
| Solyc03g115010.1.1 | Tomato | plastid | 17.49 | 9.38 |
| Solyc02g077250.2.1 | Tomato | nucleus | 17.49 | 9.04 |
| Solyc07g062680.1.1 | Tomato | nucleus | 18.03 | 8.25 |
| Solyc08g048390.1.1 | Tomato | nucleus | 16.94 | 8.01 |
| Solyc12g014140.1.1 | Tomato | nucleus | 16.94 | 7.87 |
| Solyc10g008780.1.1 | Tomato | nucleus | 18.58 | 5.84 |
Protein Annotations
| MapMan:15.5.19 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | UniProt:K4BGB5 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF18 | EnsemblPlantsGene:Solyc03g045030.1 | EnsemblPlants:Solyc03g045030.1.1 |
| InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI000276855B | : | : | : |
Description
No Description!
Coordinates
chr3:-:11362487..11363338
Molecular Weight (calculated)
21242.0 Da
IEP (calculated)
10.784
GRAVY (calculated)
-1.042
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSASNSSTH DNPLPHYISS SFHTSSPFLG FTGNQILLHQ YYQNQFSSHY YLAKNNEDYC DNSLRSFPMK KKSKKRERSC GKILTAQGPR DRRIRLSINM
101: ARKFFDLQEL LGFDKPSKTI DWLFTHSELA LEELTNWSTH QTHRPKISGS LSKSNQQQGF RKKSQKSKRS NTKRVKEKGK STS
101: ARKFFDLQEL LGFDKPSKTI DWLFTHSELA LEELTNWSTH QTHRPKISGS LSKSNQQQGF RKKSQKSKRS NTKRVKEKGK STS
001: MFPSLDTNGY DLFDPFIPHQ TTMFPSFITH IQSPNSHHHY SSPSFPFSSD FLESFDESFL INQFLLQQQD VAANVVESPW KFCKKLELKK KNEKCVDGST
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGMSTPREH NTTSIATVDE EKSPISSFSL YDYLCY
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGMSTPREH NTTSIATVDE EKSPISSFSL YDYLCY
Arabidopsis Description
BRC2TCP domain protein 12 [Source:TAIR;Acc:AT1G68800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.